Miyakogusa Predicted Gene

Lj3g3v1604060.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v1604060.1 82174_g.1
         (415 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|CB828260 weakly similar to UniRef100_A2Q1D6 Cluster: Ov...   119   1e-26
gnl|LJGI|DC593124 weakly similar to UniRef100_Q43349 Cluster: 29...    72   3e-12
gnl|LJGI|BP066148 weakly similar to UniRef100_Q2IMJ3 Cluster: Li...    62   3e-09

>gnl|LJGI|CB828260 weakly similar to UniRef100_A2Q1D6 Cluster: Ovarian tumour,
           otubain, related; n=1; Medicago truncatula|Rep: Ovarian
           tumour, otubain, related - Medicago truncatula (Barrel
           medic), partial (6%)
          Length = 557

 Score =  119 bits (60), Expect = 1e-26
 Identities = 108/124 (87%)
 Strand = Plus / Plus

                                                                       
Query: 79  agaaaagaatatgtcattatggggtgtgagaagcatggtgcgtatattccctacagagaa 138
           |||||||  ||||||||  ||||||| ||||||||||||  |||| ||||||||||||| 
Sbjct: 174 agaaaagcttatgtcatgttggggtgcgagaagcatggtaagtatgttccctacagagac 233

                                                                       
Query: 139 ccggatcttgttgaaggaacgtcaacacaaaagacaggttgtccttttaggctaaaagga 198
           || || |||||||||||||||  ||||||||||||||  ||||||||||| |||||||||
Sbjct: 234 cctgaccttgttgaaggaacgagaacacaaaagacagaatgtccttttagactaaaagga 293

               
Query: 199 cgac 202
           ||||
Sbjct: 294 cgac 297


>gnl|LJGI|DC593124 weakly similar to UniRef100_Q43349 Cluster: 29 kDa
           ribonucleoprotein, chloroplast precursor; n=1;
           Arabidopsis thaliana|Rep: 29 kDa ribonucleoprotein,
           chloroplast precursor - Arabidopsis thaliana (Mouse-ear
           cress), partial (22%)
          Length = 588

 Score = 71.9 bits (36), Expect = 3e-12
 Identities = 63/72 (87%)
 Strand = Plus / Plus

                                                                       
Query: 88  tatgtcattatggggtgtgagaagcatggtgcgtatattccctacagagaaccggatctt 147
           ||||||||  ||||||| ||||||||||||  |||| ||||||||||||| || || |||
Sbjct: 513 tatgtcatgttggggtgcgagaagcatggtaagtatgttccctacagagaccctgacctt 572

                       
Query: 148 gttgaaggaacg 159
           ||||||||||||
Sbjct: 573 gttgaaggaacg 584


>gnl|LJGI|BP066148 weakly similar to UniRef100_Q2IMJ3 Cluster: LigA; n=1;
           Anaeromyxobacter dehalogenans 2CP-C|Rep: LigA -
           Anaeromyxobacter dehalogenans (strain 2CP-C), partial
           (4%)
          Length = 477

 Score = 61.9 bits (31), Expect = 3e-09
 Identities = 59/67 (88%), Gaps = 1/67 (1%)
 Strand = Plus / Plus

                                                                       
Query: 345 ttgggttccacct-agaaagatgttggcgtccttgaaggaaaaagatccttcaaacttga 403
           ||||||||||||  ||||||||||||  | | |||||||||||  |||||||||||||||
Sbjct: 77  ttgggttccacccgagaaagatgttgttgactttgaaggaaaacaatccttcaaacttga 136

                  
Query: 404 ctaccat 410
           |||||||
Sbjct: 137 ctaccat 143