Miyakogusa Predicted Gene

Lj3g3v1603950.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v1603950.1 Non Chatacterized Hit- tr|I3SDA2|I3SDA2_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99.42,0,SUBFAMILY
NOT NAMED,NULL; MACHADO-JOSEPH DISEASE PROTEIN 1 (ATAXIN-3),NULL;
JOSEPHIN,Machado-Joseph ,CUFF.42849.1
         (1041 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC74317 similar to UniRef100_A7PNZ8 Cluster: Chromosome...  1118   0.0  
gnl|LJGI|TC73700 similar to UniRef100_Q9M391 Cluster: Ataxin-3 h...   702   0.0  

>gnl|LJGI|TC74317 similar to UniRef100_A7PNZ8 Cluster: Chromosome chr8 scaffold_23,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr8 scaffold_23, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (68%)
          Length = 704

 Score = 1118 bits (564), Expect = 0.0
 Identities = 564/564 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgatgatggaaggagcgagcaatggaggcatgttgtaccacgaggtacaagagtccaag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 atgatgatggaaggagcgagcaatggaggcatgttgtaccacgaggtacaagagtccaag 200

                                                                       
Query: 61  ctctgcgctgtgcattgtgtcaacaccgtgcttcaaggtcccttcttctctgaattcgac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctctgcgctgtgcattgtgtcaacaccgtgcttcaaggtcccttcttctctgaattcgac 260

                                                                       
Query: 121 ttggctgctctcgcttccgatctcgattgcaaggagcgtcaaatgatgatgctcccttcc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttggctgctctcgcttccgatctcgattgcaaggagcgtcaaatgatgatgctcccttcc 320

                                                                       
Query: 181 cttgcctccggtgatttcctctctcatgattcccataatgtctcccttgacggtgatttc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttgcctccggtgatttcctctctcatgattcccataatgtctcccttgacggtgatttc 380

                                                                       
Query: 241 agtatccaggtcttacaaaaggctctggaagtgtgggacctgcaagttatccctcttgac 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agtatccaggtcttacaaaaggctctggaagtgtgggacctgcaagttatccctcttgac 440

                                                                       
Query: 301 tctcctgttgccgagcctgcccagatcgatcctgagctggaaaatgccttcatctgtcac 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tctcctgttgccgagcctgcccagatcgatcctgagctggaaaatgccttcatctgtcac 500

                                                                       
Query: 361 ttgcaagaccactggttttgtatccgtaaagtgaacggggagtggtataattttgacagc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttgcaagaccactggttttgtatccgtaaagtgaacggggagtggtataattttgacagc 560

                                                                       
Query: 421 ctctacgcagccccacagcacctttccaagttctaccttgcagcctatcttgactctctg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctctacgcagccccacagcacctttccaagttctaccttgcagcctatcttgactctctg 620

                                                                       
Query: 481 aaaggtttcggatggagcatatttctggtgagaggaaattttccgaaagagttccccatc 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aaaggtttcggatggagcatatttctggtgagaggaaattttccgaaagagttccccatc 680

                                   
Query: 541 tcctcatctgaagcttctaatggc 564
           ||||||||||||||||||||||||
Sbjct: 681 tcctcatctgaagcttctaatggc 704


>gnl|LJGI|TC73700 similar to UniRef100_Q9M391 Cluster: Ataxin-3 homolog; n=1;
            Arabidopsis thaliana|Rep: Ataxin-3 homolog - Arabidopsis
            thaliana (Mouse-ear cress), partial (7%)
          Length = 569

 Score =  702 bits (354), Expect = 0.0
 Identities = 354/354 (100%)
 Strand = Plus / Plus

                                                                        
Query: 688  gaagctgatatgttttccgagatggaggatgaggatctaaaggccgcgatagcagctagt 747
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    gaagctgatatgttttccgagatggaggatgaggatctaaaggccgcgatagcagctagt 60

                                                                        
Query: 748  ctgatggattcggccccagctgtgaccaatgctgaagccagttctcctcaaattggtgat 807
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   ctgatggattcggccccagctgtgaccaatgctgaagccagttctcctcaaattggtgat 120

                                                                        
Query: 808  caaagtagtaagcaaggagcaactactgtagctagccctctgaaggatcaacacaacaaa 867
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  caaagtagtaagcaaggagcaactactgtagctagccctctgaaggatcaacacaacaaa 180

                                                                        
Query: 868  acagtggaatccattgaagctggtgtagttctcagtgatcaaagcaacaaacatggggcg 927
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  acagtggaatccattgaagctggtgtagttctcagtgatcaaagcaacaaacatggggcg 240

                                                                        
Query: 928  tctatggaagctgctagttctcttcaaattgatcagaacaaccaagaagtggcatctacg 987
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241  tctatggaagctgctagttctcttcaaattgatcagaacaaccaagaagtggcatctacg 300

                                                                  
Query: 988  gtaggagatagccctcaagatgaaaacaagaataaagaaaataccgtctgagaa 1041
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301  gtaggagatagccctcaagatgaaaacaagaataaagaaaataccgtctgagaa 354