Miyakogusa Predicted Gene
- Lj3g3v1581520.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v1581520.1 CUFF.42808.1
(379 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC75406 307 3e-83
gnl|LJGI|TC66624 similar to UniRef100_A0P8A2 Cluster: Frizzled2;... 141 4e-33
gnl|LJGI|TC75314 similar to UniRef100_Q0DEL4 Cluster: Os06g01465... 98 5e-20
gnl|LJGI|TC74357 similar to UniRef100_Q6CA16 Cluster: Similarity... 98 5e-20
gnl|LJGI|TC59377 similar to UniRef100_Q9SET1 Cluster: Cell wall-... 98 5e-20
>gnl|LJGI|TC75406
Length = 699
Score = 307 bits (155), Expect = 3e-83
Identities = 167/171 (97%)
Strand = Plus / Plus
Query: 209 acatcatcatgaagcaaccaagaccagccaccaccgccccttctaatggccgcaccacct 268
|||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||
Sbjct: 442 acatcatcatgaagcaaccaagaccagccaccaccgccccttctcatggccgcacaacct 501
Query: 269 ccatgttcttcttcactccgaactgccgccactgcgagctccttctcctcctacgcgcgc 328
||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 ccatgtttttcttcacttcgaactgccgccactgcgagctccttctcctcctacgcgcgc 561
Query: 329 accaccgtggaaacccaaccaccatcacctccttctcttcatggccgtgaa 379
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 accaccgtggaaacccaaccaccatcacctccttctcttcatggccgtgaa 612
>gnl|LJGI|TC66624 similar to UniRef100_A0P8A2 Cluster: Frizzled2; n=1; Cynops
pyrrhogaster|Rep: Frizzled2 - Cynops pyrrhogaster
(Japanese common newt), partial (6%)
Length = 776
Score = 141 bits (71), Expect = 4e-33
Identities = 74/75 (98%)
Strand = Plus / Plus
Query: 49 tacaccatcaccattttcctctcctttgctgtccacgcacaccatgtttcttcttcctca 108
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 247 tacaccatcaccattttcctctcctttgctgtccacgtacaccatgtttcttcttcctca 306
Query: 109 tcaccgtgctttctt 123
|||||||||||||||
Sbjct: 307 tcaccgtgctttctt 321
>gnl|LJGI|TC75314 similar to UniRef100_Q0DEL4 Cluster: Os06g0146500 protein; n=1;
Oryza sativa Japonica Group|Rep: Os06g0146500 protein -
Oryza sativa subsp. japonica (Rice), partial (13%)
Length = 775
Score = 97.6 bits (49), Expect = 5e-20
Identities = 55/57 (96%)
Strand = Plus / Plus
Query: 163 tcttcttctttcttcctcacgaagccaccgccgatggccacccacaacatcatcatg 219
||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||
Sbjct: 358 tcttcttctttcttcctcacgaagccaccaccgatggccacccacaacaccatcatg 414
>gnl|LJGI|TC74357 similar to UniRef100_Q6CA16 Cluster: Similarity; n=1; Yarrowia
lipolytica|Rep: Similarity - Yarrowia lipolytica
(Candida lipolytica), partial (12%)
Length = 781
Score = 97.6 bits (49), Expect = 5e-20
Identities = 55/57 (96%)
Strand = Plus / Plus
Query: 163 tcttcttctttcttcctcacgaagccaccgccgatggccacccacaacatcatcatg 219
||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||
Sbjct: 402 tcttcttctttcttcctcacgaagccaccaccgatggccacccacaacaccatcatg 458
>gnl|LJGI|TC59377 similar to UniRef100_Q9SET1 Cluster: Cell wall-plasma membrane
linker protein homolog; n=1; Arabidopsis thaliana|Rep:
Cell wall-plasma membrane linker protein homolog -
Arabidopsis thaliana (Mouse-ear cress), partial (7%)
Length = 2110
Score = 97.6 bits (49), Expect = 5e-20
Identities = 55/57 (96%)
Strand = Plus / Plus
Query: 163 tcttcttctttcttcctcacgaagccaccgccgatggccacccacaacatcatcatg 219
||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||
Sbjct: 390 tcttcttctttcttcctcacgaagccaccaccgatggccacccacaacaccatcatg 446