Miyakogusa Predicted Gene
- Lj3g3v1567740.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v1567740.1 tr|G7L5T5|G7L5T5_MEDTR TMV resistance protein N
OS=Medicago truncatula GN=MTR_7g088950 PE=4
SV=1,51.72,0.00000000000006,TIR,Toll/interleukin-1 receptor homology
(TIR) domain; DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR
CLASS,CUFF.42834.1
(2862 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|DC595824 similar to UniRef100_A2Q6G3 Cluster: TIR; AAA ... 513 e-144
gnl|LJGI|FS326053 weakly similar to UniRef100_A2Q6G5 Cluster: TI... 430 e-119
gnl|LJGI|TC61438 weakly similar to UniRef100_A2Q6G5 Cluster: TIR... 424 e-117
gnl|LJGI|DC594433 weakly similar to UniRef100_A2Q6G3 Cluster: TI... 167 5e-40
gnl|LJGI|DC592886 similar to UniRef100_A2Q6G3 Cluster: TIR; AAA ... 94 6e-18
gnl|LJGI|DC597742 similar to UniRef100_A2Q6C2 Cluster: TIR; n=1;... 88 4e-16
gnl|LJGI|FS319481 similar to UniRef100_A2Q6G3 Cluster: TIR; AAA ... 76 1e-12
gnl|LJGI|FS322253 similar to UniRef100_A2Q6G3 Cluster: TIR; AAA ... 66 1e-09
gnl|LJGI|DC600124 similar to UniRef100_A2Q6G3 Cluster: TIR; AAA ... 56 1e-06
>gnl|LJGI|DC595824 similar to UniRef100_A2Q6G3 Cluster: TIR; AAA ATPase; n=1; Medicago
truncatula|Rep: TIR; AAA ATPase - Medicago truncatula
(Barrel medic), partial (5%)
Length = 575
Score = 513 bits (259), Expect = e-144
Identities = 469/539 (87%)
Strand = Plus / Plus
Query: 2315 ctttgtgcggccatgaaggattctcacgtgatgtgtttccttctataatttggtcttgga 2374
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1 ctttgtgcggccatgaaggattctcacgtgatgtgtttccttctatcatttggtcttgga 60
Query: 2375 tgtcgccagcaaataatctcccatctctagttcaaacatctgcaggcatgtcatctcttg 2434
|||| ||| ||||||| ||| |||| |||||||||||| | ||||||||||||||||||
Sbjct: 61 tgtcaccaacaaataacctctcatccttagttcaaacatatacaggcatgtcatctcttg 120
Query: 2435 tttctttagatgtatcaaatagtagttcccatggactatcatctattcccatggaccttc 2494
|||||||| | ||||||||||||||||| | ||| |||||||||||||| |||||||||
Sbjct: 121 tttctttaaacgtatcaaatagtagttctgagggagtatcatctattcccgtggaccttc 180
Query: 2495 caaagcttccaagtctgtggatggagtgcggctcagagcttgagcgatctcgagacgctg 2554
||||||||| |||||||||||| |||| |||||||| ||| | | |||||||| || |
Sbjct: 181 caaagcttcaaagtctgtggatagagtctggctcagaacttcaactttctcgagatgcgg 240
Query: 2555 aaatagttttggatgccttatatgccacaaattcttctaaagaattggaattaactggaa 2614
||| | ||||||||||||||||||| |||||||| |||||| | ||| ||||||||| ||
Sbjct: 241 aaagaattttggatgccttatatgctacaaattcctctaaaaatttgcaattaactgcaa 300
Query: 2615 ctacgtcagaactatcaaatgtggacacttctgtgttgacggaatgcaacagtcaagtgc 2674
|||| ||| || |||||||| |||| ||| ||| ||||| |||||||| | |||||||||
Sbjct: 301 ctacatcaaaagtatcaaatatggaaactactgcgttgatggaatgcagctgtcaagtgc 360
Query: 2675 atgattctggatcaaaaagggtcttgaaatctcttctaattcaaatgggaatgaattgtc 2734
||||||| ||||||||| | | |||||| |||| || |||||||||||||||||||||
Sbjct: 361 atgattcaggatcaaaaggttccctgaaatttcttttatttcaaatgggaatgaattgtc 420
Query: 2735 aaaccaccagtattctgaaagagagcattttacagaatatgacagtcagaggatctggta 2794
|||||||||||||||||||||||||||||||||| ||| | || |||||| |||||
Sbjct: 421 ttgccaccagtattctgaaagagagcattttacagaaaatggctgtgagaggaactggtg 480
Query: 2795 ttagtttgctccctggagacaattatccagattggttgaccttcaactgtgaaggttct 2853
|||| |||||||| ||||||||||||||||| ||||| | |||||| || |||||||||
Sbjct: 481 ttagcttgctccccggagacaattatccagactggttaaacttcaattgcgaaggttct 539
>gnl|LJGI|FS326053 weakly similar to UniRef100_A2Q6G5 Cluster: TIR; n=1; Medicago
truncatula|Rep: TIR - Medicago truncatula (Barrel
medic), partial (31%)
Length = 695
Score = 430 bits (217), Expect = e-119
Identities = 325/361 (90%)
Strand = Plus / Plus
Query: 90 cagtgatgagttgttgagaatccacgatgtgttcttgagtttcagaggggaggatacgcg 149
|||| ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||
Sbjct: 305 cagttatgagttgttgagaatccatgaagtgttcttgagtttcagaggggaggatactcg 364
Query: 150 tgtttctttcacttcacatctctacgacgctcttcaaaaagtcggggtcaccgttttcag 209
|| ||| ||||||||||||||||| | |||||||||||| | ||| |||| |||||||||
Sbjct: 365 tgcttccttcacttcacatctctatgccgctcttcaaaacgccggagtcaacgttttcag 424
Query: 210 ggacgacgattctctcccaaggggagatcaaatttctacctcactgctgcaagcaattga 269
|||||||||||| || |||||||||||||||||| | | ||||||||||||||||| ||
Sbjct: 425 ggacgacgattcccttccaaggggagatcaaattacaagttcactgctgcaagcaatcga 484
Query: 270 agaatctcagatctcagttatagtgttctcactaaattatgcggattcgcggtggtgtct 329
||| ||||||||||||||||| || |||||| | |||||||| |||||||||||||| |
Sbjct: 485 agactctcagatctcagttattgttttctcaatcaattatgcaaattcgcggtggtgtat 544
Query: 330 ggaagagttggagaaaataaagaactgtcacagaaccataggccaggtggttctgccggt 389
||||||||||| |||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct: 545 ggaagagttggtgaaaataatggactgtcacagaaccataggccaggtggttctgccggt 604
Query: 390 gttctaccgcgtcgatccctctgaagtgcggcgccaaaccggtgagtttgggaagaaatt 449
||||||| | ||||||||||||||||||||||||||||| ||||| ||||| || |||||
Sbjct: 605 gttctacggtgtcgatccctctgaagtgcggcgccaaactggtgaatttggaaacaaatt 664
Query: 450 t 450
|
Sbjct: 665 t 665
>gnl|LJGI|TC61438 weakly similar to UniRef100_A2Q6G5 Cluster: TIR; n=1; Medicago
truncatula|Rep: TIR - Medicago truncatula (Barrel
medic), partial (33%)
Length = 751
Score = 424 bits (214), Expect = e-117
Identities = 328/366 (89%)
Strand = Plus / Plus
Query: 105 gagaatccacgatgtgttcttgagtttcagaggggaggatacgcgtgtttctttcacttc 164
|||||||||||||||||||||||||||||||||||| || || |||| ||| ||||||||
Sbjct: 386 gagaatccacgatgtgttcttgagtttcagaggggaagacactcgtgcttccttcacttc 445
Query: 165 acatctctacgacgctcttcaaaaagtcggggtcaccgttttcagggacgacgattctct 224
||||||||| | |||||||||||| | || |||| ||||||| ||||||||||||| ||
Sbjct: 446 acatctctatgccgctcttcaaaacgctggagtcaacgttttccgggacgacgattccct 505
Query: 225 cccaaggggagatcaaatttctacctcactgctgcaagcaattgaagaatctcagatctc 284
|||||||||||||||||| | | |||||| | |||||| ||| | ||| | || ||
Sbjct: 506 tccaaggggagatcaaattacaaattcactgatcgcagcaatcgaacagtctgaaatttc 565
Query: 285 agttatagtgttctcactaaattatgcggattcgcggtggtgtctggaagagttggagaa 344
||||| || ||||||| ||||||||||||||||||||||||| |||||||||||| |||
Sbjct: 566 ggttatcgttttctcaccaaattatgcggattcgcggtggtgtatggaagagttggtgaa 625
Query: 345 aataaagaactgtcacagaaccataggccaggtggttctgccggtgttctaccgcgtcga 404
||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 626 aataatggactgtcacagaaccataggccaggtggttctgccggtgttctacggcgtcga 685
Query: 405 tccctctgaagtgcggcgccaaaccggtgagtttgggaagaaatttcacaatcttgtaaa 464
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 tccctctgaagtgcggcgccaaaccggtgagtttgggaagaaatttcacaatcttgtaaa 745
Query: 465 caaact 470
||||||
Sbjct: 746 caaact 751
>gnl|LJGI|DC594433 weakly similar to UniRef100_A2Q6G3 Cluster: TIR; AAA ATPase; n=1;
Medicago truncatula|Rep: TIR; AAA ATPase - Medicago
truncatula (Barrel medic), partial (11%)
Length = 581
Score = 167 bits (84), Expect = 5e-40
Identities = 200/239 (83%), Gaps = 6/239 (2%)
Strand = Plus / Plus
Query: 2613 aactacgtcagaactatcaaatgtggacacttctgtgttgacggaatgcaacagtcaagt 2672
|||||| |||||| |||||||| ||| ||||||| |||| | |||||| |||||||
Sbjct: 3 aactacatcagaaatatcaaataaggaaacttctggcttgatgcaatgcagttgtcaagt 62
Query: 2673 gcatgattctggatcaaaaagggtcttgaaatctcttctaattcaaatgggaatgaattg 2732
|| |||||| ||||||||| ||||||||||||| || |||||||||||||||||||
Sbjct: 63 gcttgattcaggatcaaaagattccttgaaatctcttttatttcaaatgggaatgaattg 122
Query: 2733 tcaaaccaccagtattctgaaagagagcattttacagaatatgacagtcagaggatctgg 2792
||| ||||||||||||||||||||||||||||| |||||||| | || ||||| ||||
Sbjct: 123 ccaagccaccagtattctgaaagagagcattttagagaatatggctgttagagggtctg- 181
Query: 2793 tattagtttgctccctggagacaattatccagattggttgaccttcaactgtgaaggtt 2851
|||||||||| |||||||||||||||||||||| |||||||||| |||||||
Sbjct: 182 -----gtttgctccccggagacaattatccagattggtcaaccttcaactcggaaggtt 235
>gnl|LJGI|DC592886 similar to UniRef100_A2Q6G3 Cluster: TIR; AAA ATPase; n=1; Medicago
truncatula|Rep: TIR; AAA ATPase - Medicago truncatula
(Barrel medic), partial (13%)
Length = 596
Score = 93.7 bits (47), Expect = 6e-18
Identities = 165/202 (81%), Gaps = 3/202 (1%)
Strand = Plus / Plus
Query: 965 ttcttgtacttgacgatgtaaataaattggaccaattgaatgctctgtgtggaagtcgtg 1024
||||||| ||||| ||||| |||| |||||||||| || | || ||||||||||| |||
Sbjct: 185 ttcttgtgcttgatgatgtcaatagattggaccaactggcttctttgtgtggaagttgtg 244
Query: 1025 aatggtttggttcagggagtagaataatcatcacaaccagagatcaacatatacttag-a 1083
|||||||||| ||| |||||||| |||||||||||||||||| || ||||| | || |
Sbjct: 245 aatggtttggccaaggaagtagaattatcatcacaaccagagatgaaaatatagtcagca 304
Query: 1084 gggaa--tagagttgaccaagtatacttaatggaagagatggatgaaagtgaatctattg 1141
||| | | ||||||| | ||||| ||| |||| |||||||| | |||||| |||
Sbjct: 305 gggcatttggagttgagcttgtatatagaataaaagaaatggatgagaaggaatctcttg 364
Query: 1142 agctttttagttggcatgcatt 1163
||||||||||||||||||||||
Sbjct: 365 agctttttagttggcatgcatt 386
>gnl|LJGI|DC597742 similar to UniRef100_A2Q6C2 Cluster: TIR; n=1; Medicago
truncatula|Rep: TIR - Medicago truncatula (Barrel medic),
partial (16%)
Length = 590
Score = 87.7 bits (44), Expect = 4e-16
Identities = 188/236 (79%)
Strand = Plus / Plus
Query: 2143 atctataagttgaaatctctgaaaaccctcattctttctggatgtctaatgattgacaag 2202
|||||| ||||||||||| ||| ||| ||||| ||||| || ||| || ||||| |||
Sbjct: 5 atctatcagttgaaatctttgacaactctcatcctttcaggttgttcaaaaattgataag 64
Query: 2203 ttggaagaagacgtcgaacagatggaatctttgacaaccctgattgcagacaacactgca 2262
||||||||||| | | ||||||||||| |||||||| || |||||| | | || ||
Sbjct: 65 ttggaagaagatatagtgcagatggaatccttgacaacacttattgcaaaagatacagct 124
Query: 2263 ataacaagagttccctattcattagtaaggtcaaaaagcattggttatatatctttgtgc 2322
|||| ||||||||||||| || |||| | |||||||| || |||||||| || ||
Sbjct: 125 ataaaggaagttccctattcaatactaagattgaaaagcataggatatatatccttatgt 184
Query: 2323 ggccatgaaggattctcacgtgatgtgtttccttctataatttggtcttggatgtc 2378
|| |||||||||| |||||||||| ||||||||| | ||| |||||||||||||
Sbjct: 185 ggatatgaaggattaacacgtgatgtttttccttctctcattcggtcttggatgtc 240
>gnl|LJGI|FS319481 similar to UniRef100_A2Q6G3 Cluster: TIR; AAA ATPase; n=1; Medicago
truncatula|Rep: TIR; AAA ATPase - Medicago truncatula
(Barrel medic), partial (16%)
Length = 710
Score = 75.8 bits (38), Expect = 1e-12
Identities = 86/102 (84%)
Strand = Plus / Plus
Query: 1467 tgcagaaattggaataagtgtccttgttgaaagaagtcttgtaactgttgatgataagaa 1526
|||||||||||||||||||||||| || || | | ||||||||| ||||| |||||
Sbjct: 249 tgcagaaattggaataagtgtcctcgtacaacaatgccttgtaactattgataggaagaa 308
Query: 1527 caagcttggaatgcatgacttgctgcgagacatggggagaga 1568
|||| | ||||||||||| ||||| ||||||||||| |||||
Sbjct: 309 caagatcggaatgcatgatttgctacgagacatgggaagaga 350
Score = 54.0 bits (27), Expect = 5e-06
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 1280 taacagaatggaagagtgtcttggagaaactcaaaagaattcccaat 1326
||||||| ||||||||||| ||||||||||||||| |||||||||
Sbjct: 59 taacagagtggaagagtgtactggagaaactcaaaatgattcccaat 105
>gnl|LJGI|FS322253 similar to UniRef100_A2Q6G3 Cluster: TIR; AAA ATPase; n=1; Medicago
truncatula|Rep: TIR; AAA ATPase - Medicago truncatula
(Barrel medic), partial (11%)
Length = 680
Score = 65.9 bits (33), Expect = 1e-09
Identities = 81/97 (83%)
Strand = Plus / Plus
Query: 1472 aaattggaataagtgtccttgttgaaagaagtcttgtaactgttgatgataagaacaagc 1531
||||||||||||||||||| || || | | ||||||||| ||||| |||||||||
Sbjct: 170 aaattggaataagtgtcctcgtacaacaatgccttgtaactattgataggaagaacaaga 229
Query: 1532 ttggaatgcatgacttgctgcgagacatggggagaga 1568
| ||||||||||| ||||| ||||||||||| |||||
Sbjct: 230 tcggaatgcatgatttgctacgagacatgggaagaga 266
>gnl|LJGI|DC600124 similar to UniRef100_A2Q6G3 Cluster: TIR; AAA ATPase; n=1; Medicago
truncatula|Rep: TIR; AAA ATPase - Medicago truncatula
(Barrel medic), partial (11%)
Length = 567
Score = 56.0 bits (28), Expect = 1e-06
Identities = 155/193 (80%), Gaps = 7/193 (3%)
Strand = Plus / Plus
Query: 1139 ttgagctttttagttggcatgcattcaagaacgcaag-ccctagtgaagattttgctgaa 1197
||||||||||||||||||||||||| ||||| |||| ||| || |||| |||||||||
Sbjct: 108 ttgagctttttagttggcatgcatttaagaaaccaagtcccgag-gaaggttttgctgat 166
Query: 1198 atttctataaatttagttgagtattctgggggattgccgctagctttagaagtccttggg 1257
|||| | || ||||| | || | |||||| ||||| |||||| | |||| |||||
Sbjct: 167 ctttcaagcgatgtagttaaatactgtggggggttgccactagctcttcaagtaattggg 226
Query: 1258 tcctatttgttcgac----aggggggtaacagaatggaagagtgtcttggagaaactcaa 1313
|||| |||||| ||| ||| ||||||||| ||||||||||| |||||||||||||
Sbjct: 227 tcctttttgtt-gactaggaggagggtaacagtgtggaagagtgtactggagaaactcaa 285
Query: 1314 aagaattcccaat 1326
|| |||||||||
Sbjct: 286 aatgattcccaat 298