Miyakogusa Predicted Gene

Lj3g3v1567740.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v1567740.1 tr|G7L5T5|G7L5T5_MEDTR TMV resistance protein N
OS=Medicago truncatula GN=MTR_7g088950 PE=4
SV=1,51.72,0.00000000000006,TIR,Toll/interleukin-1 receptor homology
(TIR) domain; DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR
CLASS,CUFF.42834.1
         (2862 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|DC595824 similar to UniRef100_A2Q6G3 Cluster: TIR; AAA ...   513   e-144
gnl|LJGI|FS326053 weakly similar to UniRef100_A2Q6G5 Cluster: TI...   430   e-119
gnl|LJGI|TC61438 weakly similar to UniRef100_A2Q6G5 Cluster: TIR...   424   e-117
gnl|LJGI|DC594433 weakly similar to UniRef100_A2Q6G3 Cluster: TI...   167   5e-40
gnl|LJGI|DC592886 similar to UniRef100_A2Q6G3 Cluster: TIR; AAA ...    94   6e-18
gnl|LJGI|DC597742 similar to UniRef100_A2Q6C2 Cluster: TIR; n=1;...    88   4e-16
gnl|LJGI|FS319481 similar to UniRef100_A2Q6G3 Cluster: TIR; AAA ...    76   1e-12
gnl|LJGI|FS322253 similar to UniRef100_A2Q6G3 Cluster: TIR; AAA ...    66   1e-09
gnl|LJGI|DC600124 similar to UniRef100_A2Q6G3 Cluster: TIR; AAA ...    56   1e-06

>gnl|LJGI|DC595824 similar to UniRef100_A2Q6G3 Cluster: TIR; AAA ATPase; n=1; Medicago
            truncatula|Rep: TIR; AAA ATPase - Medicago truncatula
            (Barrel medic), partial (5%)
          Length = 575

 Score =  513 bits (259), Expect = e-144
 Identities = 469/539 (87%)
 Strand = Plus / Plus

                                                                        
Query: 2315 ctttgtgcggccatgaaggattctcacgtgatgtgtttccttctataatttggtcttgga 2374
            |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1    ctttgtgcggccatgaaggattctcacgtgatgtgtttccttctatcatttggtcttgga 60

                                                                        
Query: 2375 tgtcgccagcaaataatctcccatctctagttcaaacatctgcaggcatgtcatctcttg 2434
            |||| ||| ||||||| ||| ||||  |||||||||||| | ||||||||||||||||||
Sbjct: 61   tgtcaccaacaaataacctctcatccttagttcaaacatatacaggcatgtcatctcttg 120

                                                                        
Query: 2435 tttctttagatgtatcaaatagtagttcccatggactatcatctattcccatggaccttc 2494
            |||||||| | |||||||||||||||||  | ||| |||||||||||||| |||||||||
Sbjct: 121  tttctttaaacgtatcaaatagtagttctgagggagtatcatctattcccgtggaccttc 180

                                                                        
Query: 2495 caaagcttccaagtctgtggatggagtgcggctcagagcttgagcgatctcgagacgctg 2554
            ||||||||| |||||||||||| ||||  |||||||| ||| | |  |||||||| || |
Sbjct: 181  caaagcttcaaagtctgtggatagagtctggctcagaacttcaactttctcgagatgcgg 240

                                                                        
Query: 2555 aaatagttttggatgccttatatgccacaaattcttctaaagaattggaattaactggaa 2614
            ||| | ||||||||||||||||||| |||||||| |||||| | ||| ||||||||| ||
Sbjct: 241  aaagaattttggatgccttatatgctacaaattcctctaaaaatttgcaattaactgcaa 300

                                                                        
Query: 2615 ctacgtcagaactatcaaatgtggacacttctgtgttgacggaatgcaacagtcaagtgc 2674
            |||| ||| || |||||||| |||| ||| ||| ||||| |||||||| | |||||||||
Sbjct: 301  ctacatcaaaagtatcaaatatggaaactactgcgttgatggaatgcagctgtcaagtgc 360

                                                                        
Query: 2675 atgattctggatcaaaaagggtcttgaaatctcttctaattcaaatgggaatgaattgtc 2734
            ||||||| ||||||||| |   | |||||| |||| || |||||||||||||||||||||
Sbjct: 361  atgattcaggatcaaaaggttccctgaaatttcttttatttcaaatgggaatgaattgtc 420

                                                                        
Query: 2735 aaaccaccagtattctgaaagagagcattttacagaatatgacagtcagaggatctggta 2794
               |||||||||||||||||||||||||||||||||| ||| | || |||||| ||||| 
Sbjct: 421  ttgccaccagtattctgaaagagagcattttacagaaaatggctgtgagaggaactggtg 480

                                                                       
Query: 2795 ttagtttgctccctggagacaattatccagattggttgaccttcaactgtgaaggttct 2853
            |||| |||||||| ||||||||||||||||| ||||| | |||||| || |||||||||
Sbjct: 481  ttagcttgctccccggagacaattatccagactggttaaacttcaattgcgaaggttct 539


>gnl|LJGI|FS326053 weakly similar to UniRef100_A2Q6G5 Cluster: TIR; n=1; Medicago
           truncatula|Rep: TIR - Medicago truncatula (Barrel
           medic), partial (31%)
          Length = 695

 Score =  430 bits (217), Expect = e-119
 Identities = 325/361 (90%)
 Strand = Plus / Plus

                                                                       
Query: 90  cagtgatgagttgttgagaatccacgatgtgttcttgagtttcagaggggaggatacgcg 149
           |||| ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||
Sbjct: 305 cagttatgagttgttgagaatccatgaagtgttcttgagtttcagaggggaggatactcg 364

                                                                       
Query: 150 tgtttctttcacttcacatctctacgacgctcttcaaaaagtcggggtcaccgttttcag 209
           || ||| ||||||||||||||||| | |||||||||||| | ||| |||| |||||||||
Sbjct: 365 tgcttccttcacttcacatctctatgccgctcttcaaaacgccggagtcaacgttttcag 424

                                                                       
Query: 210 ggacgacgattctctcccaaggggagatcaaatttctacctcactgctgcaagcaattga 269
           |||||||||||| || |||||||||||||||||| | |  ||||||||||||||||| ||
Sbjct: 425 ggacgacgattcccttccaaggggagatcaaattacaagttcactgctgcaagcaatcga 484

                                                                       
Query: 270 agaatctcagatctcagttatagtgttctcactaaattatgcggattcgcggtggtgtct 329
           ||| ||||||||||||||||| || |||||| | ||||||||  |||||||||||||| |
Sbjct: 485 agactctcagatctcagttattgttttctcaatcaattatgcaaattcgcggtggtgtat 544

                                                                       
Query: 330 ggaagagttggagaaaataaagaactgtcacagaaccataggccaggtggttctgccggt 389
           ||||||||||| |||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct: 545 ggaagagttggtgaaaataatggactgtcacagaaccataggccaggtggttctgccggt 604

                                                                       
Query: 390 gttctaccgcgtcgatccctctgaagtgcggcgccaaaccggtgagtttgggaagaaatt 449
           ||||||| | ||||||||||||||||||||||||||||| ||||| ||||| || |||||
Sbjct: 605 gttctacggtgtcgatccctctgaagtgcggcgccaaactggtgaatttggaaacaaatt 664

            
Query: 450 t 450
           |
Sbjct: 665 t 665


>gnl|LJGI|TC61438 weakly similar to UniRef100_A2Q6G5 Cluster: TIR; n=1; Medicago
           truncatula|Rep: TIR - Medicago truncatula (Barrel
           medic), partial (33%)
          Length = 751

 Score =  424 bits (214), Expect = e-117
 Identities = 328/366 (89%)
 Strand = Plus / Plus

                                                                       
Query: 105 gagaatccacgatgtgttcttgagtttcagaggggaggatacgcgtgtttctttcacttc 164
           |||||||||||||||||||||||||||||||||||| || || |||| ||| ||||||||
Sbjct: 386 gagaatccacgatgtgttcttgagtttcagaggggaagacactcgtgcttccttcacttc 445

                                                                       
Query: 165 acatctctacgacgctcttcaaaaagtcggggtcaccgttttcagggacgacgattctct 224
           ||||||||| | |||||||||||| |  || |||| ||||||| ||||||||||||| ||
Sbjct: 446 acatctctatgccgctcttcaaaacgctggagtcaacgttttccgggacgacgattccct 505

                                                                       
Query: 225 cccaaggggagatcaaatttctacctcactgctgcaagcaattgaagaatctcagatctc 284
            |||||||||||||||||| | |  |||||| |   |||||| ||| | ||| | || ||
Sbjct: 506 tccaaggggagatcaaattacaaattcactgatcgcagcaatcgaacagtctgaaatttc 565

                                                                       
Query: 285 agttatagtgttctcactaaattatgcggattcgcggtggtgtctggaagagttggagaa 344
            ||||| || ||||||| ||||||||||||||||||||||||| |||||||||||| |||
Sbjct: 566 ggttatcgttttctcaccaaattatgcggattcgcggtggtgtatggaagagttggtgaa 625

                                                                       
Query: 345 aataaagaactgtcacagaaccataggccaggtggttctgccggtgttctaccgcgtcga 404
           ||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 626 aataatggactgtcacagaaccataggccaggtggttctgccggtgttctacggcgtcga 685

                                                                       
Query: 405 tccctctgaagtgcggcgccaaaccggtgagtttgggaagaaatttcacaatcttgtaaa 464
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 tccctctgaagtgcggcgccaaaccggtgagtttgggaagaaatttcacaatcttgtaaa 745

                 
Query: 465 caaact 470
           ||||||
Sbjct: 746 caaact 751


>gnl|LJGI|DC594433 weakly similar to UniRef100_A2Q6G3 Cluster: TIR; AAA ATPase; n=1;
            Medicago truncatula|Rep: TIR; AAA ATPase - Medicago
            truncatula (Barrel medic), partial (11%)
          Length = 581

 Score =  167 bits (84), Expect = 5e-40
 Identities = 200/239 (83%), Gaps = 6/239 (2%)
 Strand = Plus / Plus

                                                                        
Query: 2613 aactacgtcagaactatcaaatgtggacacttctgtgttgacggaatgcaacagtcaagt 2672
            |||||| |||||| ||||||||  ||| |||||||  |||| | ||||||   |||||||
Sbjct: 3    aactacatcagaaatatcaaataaggaaacttctggcttgatgcaatgcagttgtcaagt 62

                                                                        
Query: 2673 gcatgattctggatcaaaaagggtcttgaaatctcttctaattcaaatgggaatgaattg 2732
            || |||||| |||||||||     ||||||||||||| || |||||||||||||||||||
Sbjct: 63   gcttgattcaggatcaaaagattccttgaaatctcttttatttcaaatgggaatgaattg 122

                                                                        
Query: 2733 tcaaaccaccagtattctgaaagagagcattttacagaatatgacagtcagaggatctgg 2792
             ||| ||||||||||||||||||||||||||||| |||||||| | || ||||| |||| 
Sbjct: 123  ccaagccaccagtattctgaaagagagcattttagagaatatggctgttagagggtctg- 181

                                                                       
Query: 2793 tattagtttgctccctggagacaattatccagattggttgaccttcaactgtgaaggtt 2851
                 |||||||||| ||||||||||||||||||||||  ||||||||||  |||||||
Sbjct: 182  -----gtttgctccccggagacaattatccagattggtcaaccttcaactcggaaggtt 235


>gnl|LJGI|DC592886 similar to UniRef100_A2Q6G3 Cluster: TIR; AAA ATPase; n=1; Medicago
            truncatula|Rep: TIR; AAA ATPase - Medicago truncatula
            (Barrel medic), partial (13%)
          Length = 596

 Score = 93.7 bits (47), Expect = 6e-18
 Identities = 165/202 (81%), Gaps = 3/202 (1%)
 Strand = Plus / Plus

                                                                        
Query: 965  ttcttgtacttgacgatgtaaataaattggaccaattgaatgctctgtgtggaagtcgtg 1024
            ||||||| ||||| ||||| |||| |||||||||| ||  | || ||||||||||| |||
Sbjct: 185  ttcttgtgcttgatgatgtcaatagattggaccaactggcttctttgtgtggaagttgtg 244

                                                                        
Query: 1025 aatggtttggttcagggagtagaataatcatcacaaccagagatcaacatatacttag-a 1083
            ||||||||||   ||| |||||||| |||||||||||||||||| || ||||| | || |
Sbjct: 245  aatggtttggccaaggaagtagaattatcatcacaaccagagatgaaaatatagtcagca 304

                                                                        
Query: 1084 gggaa--tagagttgaccaagtatacttaatggaagagatggatgaaagtgaatctattg 1141
            ||| |  | ||||||| |  |||||   |||  |||| |||||||| |  |||||| |||
Sbjct: 305  gggcatttggagttgagcttgtatatagaataaaagaaatggatgagaaggaatctcttg 364

                                  
Query: 1142 agctttttagttggcatgcatt 1163
            ||||||||||||||||||||||
Sbjct: 365  agctttttagttggcatgcatt 386


>gnl|LJGI|DC597742 similar to UniRef100_A2Q6C2 Cluster: TIR; n=1; Medicago
            truncatula|Rep: TIR - Medicago truncatula (Barrel medic),
            partial (16%)
          Length = 590

 Score = 87.7 bits (44), Expect = 4e-16
 Identities = 188/236 (79%)
 Strand = Plus / Plus

                                                                        
Query: 2143 atctataagttgaaatctctgaaaaccctcattctttctggatgtctaatgattgacaag 2202
            |||||| ||||||||||| ||| ||| ||||| ||||| || |||  ||  ||||| |||
Sbjct: 5    atctatcagttgaaatctttgacaactctcatcctttcaggttgttcaaaaattgataag 64

                                                                        
Query: 2203 ttggaagaagacgtcgaacagatggaatctttgacaaccctgattgcagacaacactgca 2262
            |||||||||||  | |  ||||||||||| |||||||| || |||||| |  | || || 
Sbjct: 65   ttggaagaagatatagtgcagatggaatccttgacaacacttattgcaaaagatacagct 124

                                                                        
Query: 2263 ataacaagagttccctattcattagtaaggtcaaaaagcattggttatatatctttgtgc 2322
            ||||    ||||||||||||| || |||| |  |||||||| || |||||||| || || 
Sbjct: 125  ataaaggaagttccctattcaatactaagattgaaaagcataggatatatatccttatgt 184

                                                                    
Query: 2323 ggccatgaaggattctcacgtgatgtgtttccttctataatttggtcttggatgtc 2378
            ||  ||||||||||  |||||||||| ||||||||| | ||| |||||||||||||
Sbjct: 185  ggatatgaaggattaacacgtgatgtttttccttctctcattcggtcttggatgtc 240


>gnl|LJGI|FS319481 similar to UniRef100_A2Q6G3 Cluster: TIR; AAA ATPase; n=1; Medicago
            truncatula|Rep: TIR; AAA ATPase - Medicago truncatula
            (Barrel medic), partial (16%)
          Length = 710

 Score = 75.8 bits (38), Expect = 1e-12
 Identities = 86/102 (84%)
 Strand = Plus / Plus

                                                                        
Query: 1467 tgcagaaattggaataagtgtccttgttgaaagaagtcttgtaactgttgatgataagaa 1526
            |||||||||||||||||||||||| ||  ||  | | ||||||||| |||||   |||||
Sbjct: 249  tgcagaaattggaataagtgtcctcgtacaacaatgccttgtaactattgataggaagaa 308

                                                      
Query: 1527 caagcttggaatgcatgacttgctgcgagacatggggagaga 1568
            |||| | ||||||||||| ||||| ||||||||||| |||||
Sbjct: 309  caagatcggaatgcatgatttgctacgagacatgggaagaga 350



 Score = 54.0 bits (27), Expect = 5e-06
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                           
Query: 1280 taacagaatggaagagtgtcttggagaaactcaaaagaattcccaat 1326
            ||||||| |||||||||||  |||||||||||||||  |||||||||
Sbjct: 59   taacagagtggaagagtgtactggagaaactcaaaatgattcccaat 105


>gnl|LJGI|FS322253 similar to UniRef100_A2Q6G3 Cluster: TIR; AAA ATPase; n=1; Medicago
            truncatula|Rep: TIR; AAA ATPase - Medicago truncatula
            (Barrel medic), partial (11%)
          Length = 680

 Score = 65.9 bits (33), Expect = 1e-09
 Identities = 81/97 (83%)
 Strand = Plus / Plus

                                                                        
Query: 1472 aaattggaataagtgtccttgttgaaagaagtcttgtaactgttgatgataagaacaagc 1531
            ||||||||||||||||||| ||  ||  | | ||||||||| |||||   ||||||||| 
Sbjct: 170  aaattggaataagtgtcctcgtacaacaatgccttgtaactattgataggaagaacaaga 229

                                                 
Query: 1532 ttggaatgcatgacttgctgcgagacatggggagaga 1568
            | ||||||||||| ||||| ||||||||||| |||||
Sbjct: 230  tcggaatgcatgatttgctacgagacatgggaagaga 266


>gnl|LJGI|DC600124 similar to UniRef100_A2Q6G3 Cluster: TIR; AAA ATPase; n=1; Medicago
            truncatula|Rep: TIR; AAA ATPase - Medicago truncatula
            (Barrel medic), partial (11%)
          Length = 567

 Score = 56.0 bits (28), Expect = 1e-06
 Identities = 155/193 (80%), Gaps = 7/193 (3%)
 Strand = Plus / Plus

                                                                        
Query: 1139 ttgagctttttagttggcatgcattcaagaacgcaag-ccctagtgaagattttgctgaa 1197
            ||||||||||||||||||||||||| |||||  |||| ||| || |||| ||||||||| 
Sbjct: 108  ttgagctttttagttggcatgcatttaagaaaccaagtcccgag-gaaggttttgctgat 166

                                                                        
Query: 1198 atttctataaatttagttgagtattctgggggattgccgctagctttagaagtccttggg 1257
             |||| |   || ||||| | || | |||||| ||||| |||||| |  ||||  |||||
Sbjct: 167  ctttcaagcgatgtagttaaatactgtggggggttgccactagctcttcaagtaattggg 226

                                                                        
Query: 1258 tcctatttgttcgac----aggggggtaacagaatggaagagtgtcttggagaaactcaa 1313
            |||| |||||| |||    ||| |||||||||  |||||||||||  |||||||||||||
Sbjct: 227  tcctttttgtt-gactaggaggagggtaacagtgtggaagagtgtactggagaaactcaa 285

                         
Query: 1314 aagaattcccaat 1326
            ||  |||||||||
Sbjct: 286  aatgattcccaat 298