Miyakogusa Predicted Gene

Lj3g3v1556600.2

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v1556600.2 tr|B9I808|B9I808_POPTR Tir-nbs-lrr resistance
protein OS=Populus trichocarpa GN=POPTRDRAFT_571594
PE,37.5,0.00000000000004,TIR,Toll/interleukin-1 receptor homology
(TIR) domain; Toll,Toll/interleukin-1 receptor homology
(TI,CUFF.42794.2
         (1578 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS343073 weakly similar to UniRef100_A7QHI1 Cluster: Ch...   200   2e-50
gnl|LJGI|DC593321 weakly similar to UniRef100_A7QH95 Cluster: Ch...    64   3e-09
gnl|LJGI|TC81691 weakly similar to UniRef100_A2Q338 Cluster: RNA...    56   7e-07

>gnl|LJGI|FS343073 weakly similar to UniRef100_A7QHI1 Cluster: Chromosome chr5
           scaffold_98, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr5 scaffold_98, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (13%)
          Length = 827

 Score =  200 bits (101), Expect = 2e-50
 Identities = 401/501 (80%)
 Strand = Plus / Plus

                                                                       
Query: 109 gtgttcctcagttttaaaggtgctgacacccgcaacacttttgtggaccatctttacact 168
           |||||| ||||||| | |||| ||||||| |||||||| |||||||| ||||||||| | 
Sbjct: 297 gtgttcatcagtttcagaggttctgacactcgcaacacctttgtggatcatctttacgcc 356

                                                                       
Query: 169 catctcaccagaaaaggcattttcaccttcaaggatgacacaagtctccggaaaggaaaa 228
           ||||||  | ||||||||||||||  ||||||||||||||  |  |||| ||||||| | 
Sbjct: 357 catctcgtccgaaaaggcattttcgtcttcaaggatgacaagaagctccagaaaggagag 416

                                                                       
Query: 229 gccatttcaccacaactcgtgcaagccattaaagactcgcgggtttctatcgttatcttc 288
            |||||||| | || ||  | ||||| |||  | | || || |||||||| ||| | |||
Sbjct: 417 tccatttcagctcagcttctacaagcaattcgaaattcacgagtttctattgttgttttc 476

                                                                       
Query: 289 tctaaagactatgctaagtctacatggtgtttggatgagatggccactattgctgattgc 348
           || ||| | |||||| |||| |  |||||||||||||| |||||  |||||||||| |||
Sbjct: 477 tcgaaaaattatgctgagtcaaggtggtgtttggatgaaatggctgctattgctgaatgc 536

                                                                       
Query: 349 agtaaagaattgaaacaaaccgttttccctgttttctatgatgtcgacccatctcattta 408
            || |||| || || ||||| ||||||||||||||||||||||| || || |||| | ||
Sbjct: 537 tgtgaagattttaagcaaactgttttccctgttttctatgatgtggatccttctcctgta 596

                                                                       
Query: 409 cgaaagcaagatggggtgtgccatattgcctttgcttcacactttaggaagttcaaagat 468
            |||| ||  |||||||||   | | |||||||| ||  ||| |   ||  |||||| ||
Sbjct: 597 agaaaccagaatggggtgtatgaaaatgcctttgttttccacatgctgagattcaaacat 656

                                                                       
Query: 469 gatccgggcaaggtttaccggtggcagagagctatgacaagtttggctagttcagctggt 528
           ||| | | || |||| | || ||| |||||||||||| |||||||||| | ||||| |||
Sbjct: 657 gatgcagacagggttgatcgatggaagagagctatgagaagtttggctggatcagcaggt 716

                                                                       
Query: 529 tgggatgtcaggaacaagccagagtttggagagattgaaaaaattgttcaggcagtaata 588
           |||||||||||||| |||||||| ||| ||||||||||||| |||||| ||||||| |||
Sbjct: 717 tgggatgtcaggaataagccagaatttcgagagattgaaaatattgttgaggcagttata 776

                                
Query: 589 agagcattggatcataaattt 609
             |||||||| ||||||||||
Sbjct: 777 gaagcattgggtcataaattt 797


>gnl|LJGI|DC593321 weakly similar to UniRef100_A7QH95 Cluster: Chromosome chr18
            scaffold_96, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome chr18 scaffold_96, whole genome
            shotgun sequence - Vitis vinifera (Grape), partial (11%)
          Length = 553

 Score = 63.9 bits (32), Expect = 3e-09
 Identities = 44/48 (91%)
 Strand = Plus / Plus

                                                            
Query: 1529 tgcatgaaatgttacaagaattggggaagaaaattgttcggcaccaat 1576
            |||| |||||| ||||||| ||||||||||||||||||||||| ||||
Sbjct: 1    tgcacgaaatggtacaagatttggggaagaaaattgttcggcaacaat 48


>gnl|LJGI|TC81691 weakly similar to UniRef100_A2Q338 Cluster: RNA-directed DNA
           polymerase; n=1; Medicago truncatula|Rep: RNA-directed
           DNA polymerase - Medicago truncatula (Barrel medic),
           partial (8%)
          Length = 432

 Score = 56.0 bits (28), Expect = 7e-07
 Identities = 52/60 (86%)
 Strand = Plus / Plus

                                                                       
Query: 691 gatgatgatattcgagtcttagggatttgggggatgggtggaataggaaagaccactcat 750
           ||||| ||| ||||||| ||||| |||||| ||| ||| |||||||||||||| ||||||
Sbjct: 169 gatgaagattttcgagttttaggtatttggaggacgggcggaataggaaagacaactcat 228