Miyakogusa Predicted Gene

Lj3g3v1556600.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v1556600.1 tr|A6YTE0|A6YTE0_CUCME TIR-NBS-LRR disease
resistance protein OS=Cucumis melo subsp. melo PE=4
SV=2,31.58,8e-18,LRR_1,Leucine-rich repeat; LRR_3,Leucine-rich repeat
3; no description,NULL; L domain-like,NULL; DIS,CUFF.42794.1
         (1365 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|DC593321 weakly similar to UniRef100_A7QH95 Cluster: Ch...   143   3e-33
gnl|LJGI|TC80392 weakly similar to UniRef100_A7QGG0 Cluster: Chr...    70   4e-11

>gnl|LJGI|DC593321 weakly similar to UniRef100_A7QH95 Cluster: Chromosome chr18
           scaffold_96, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr18 scaffold_96, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (11%)
          Length = 553

 Score =  143 bits (72), Expect = 3e-33
 Identities = 290/360 (80%), Gaps = 2/360 (0%)
 Strand = Plus / Plus

                                                                       
Query: 91  gaaggattgtcaaaaatgaagagtcttagattgctgatattatatcataggaatttttca 150
           ||||||||||||| ||||| | | |||| | | || |||||| |||||  ||| ||||||
Sbjct: 195 gaaggattgtcaataatgaggggccttataattcttatattacatcatcagaacttttca 254

                                                                       
Query: 151 ggaagactcactttcctttctaacaatttagaataccttttgtggcatgattaccctttt 210
           ||||| |||  ||| ||||||||||| ||  | || ||| ||||||||| ||| ||||||
Sbjct: 255 ggaagcctccattttctttctaacaacttgcagtatcttctgtggcatggttatcctttt 314

                                                                       
Query: 211 -cttattctgccatcaacatttgagccatattatcttgtggaattgaatatgcctcatag 269
            ||| || |||| ||||  |||||||||| |  |||||| ||||||||||||||| ||||
Sbjct: 315 gcttctt-tgccttcaaactttgagccatttcgtcttgttgaattgaatatgccttatag 373

                                                                       
Query: 270 tagcatccaacgactttggaagggcaccaagcacctcccctgtctgagaagggtggatat 329
           ||||||||||||||| ||| | |||  |||| | ||||| | | ||| || | ||||| |
Sbjct: 374 tagcatccaacgactatgggaaggccgcaaggatctcccatttttgaaaaagatggatct 433

                                                                       
Query: 330 gagcaactctaagtatcttttggagactccaagttttgaagggattccaaatcttgagcg 389
           ||||||||| ||||||||   |||||| || | ||||||||| |    ||  |||||| |
Sbjct: 434 gagcaactccaagtatctcacggagacccccaattttgaaggaagcagaagacttgagag 493

                                                                       
Query: 390 gttagatcttacaggatgcacaaacttattacatgtccatccatccattggagttcttac 449
           | ||||||||||||||||||||||| |||| || ||||||||||| |||||| |||||||
Sbjct: 494 gctagatcttacaggatgcacaaacctattgcaggtccatccatcaattggacttcttac 553


>gnl|LJGI|TC80392 weakly similar to UniRef100_A7QGG0 Cluster: Chromosome undetermined
           scaffold_92, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_92, whole
           genome shotgun sequence - Vitis vinifera (Grape),
           partial (7%)
          Length = 975

 Score = 69.9 bits (35), Expect = 4e-11
 Identities = 53/59 (89%)
 Strand = Plus / Plus

                                                                      
Query: 875 atgctattggagagttaaggtgtttagcaagactaaatctacaaggaaacaattttgtt 933
           |||||||||||   ||| ||||||||| |||||||||||||||||||||||| ||||||
Sbjct: 49  atgctattggaagattatggtgtttagaaagactaaatctacaaggaaacaactttgtt 107