Miyakogusa Predicted Gene

Lj3g3v1545550.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v1545550.1 CUFF.42790.1
         (1602 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AU089457 similar to UniRef100_A7P0Z9 Cluster: Chromosom...   170   2e-41
gnl|LJGI|TC61728 similar to UniRef100_A7PAH6 Cluster: Chromosome...    56   7e-07

>gnl|LJGI|AU089457 similar to UniRef100_A7P0Z9 Cluster: Chromosome chr19 scaffold_4,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr19 scaffold_4, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (14%)
          Length = 476

 Score =  170 bits (86), Expect = 2e-41
 Identities = 185/218 (84%)
 Strand = Plus / Plus

                                                                        
Query: 1375 gcatttcatggtcatgttcacattatcgatcctttttggcatatgctaggattgggatat 1434
            ||||| |||||| |||| || | ||| |||||||||||||| ||||| ||||| ||||||
Sbjct: 1    gcattccatggttatgtccatactattgatcctttttggcacatgctgggattaggatat 60

                                                                        
Query: 1435 caggaaaatacgagttctgctgatgttgagagtgctggtgtcattcatttcaatggcagg 1494
            ||||||||||| |||| |||||||| |||||||||||  ||||| ||||| |||||||||
Sbjct: 61   caggaaaatacaagttttgctgatgctgagagtgctgcagtcatccattttaatggcagg 120

                                                                        
Query: 1495 gcgaagccatggctagaaatagcttttccgcagttacggccattgtggacaaagtatgtc 1554
            || |||||||||||||| || |||||| | ||  || ||||| ||||||| |||||||| 
Sbjct: 121  gcaaagccatggctagatattgctttttcacaactaaggccactgtggaccaagtatgtt 180

                                                  
Query: 1555 aatttctcagataagttcatcaagagttgtcacattag 1592
             | || || ||||| ||||| |||||||||||||||||
Sbjct: 181  gacttttcggataacttcattaagagttgtcacattag 218


>gnl|LJGI|TC61728 similar to UniRef100_A7PAH6 Cluster: Chromosome chr14 scaffold_9,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr14 scaffold_9, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (27%)
          Length = 782

 Score = 56.0 bits (28), Expect = 7e-07
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                            
Query: 1228 tgtgcttgggcctatggcatgaacatttttgatttggaggcttggagg 1275
            ||||||||||||||||| ||||| || |||||| | ||||||||||||
Sbjct: 82   tgtgcttgggcctatggtatgaatatatttgatcttgaggcttggagg 129