Miyakogusa Predicted Gene

Lj3g3v1541210.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v1541210.1 Non Chatacterized Hit- tr|C6T493|C6T493_SOYBN
Putative uncharacterized protein OS=Glycine max PE=2
S,47.33,0.00000000003,seg,NULL,
gene.Ljchr3_pseudomol_20120830.path1.gene3515.1
         (771 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC62818 similar to UniRef100_A7Q4X9 Cluster: Chromosome...   254   7e-67

>gnl|LJGI|TC62818 similar to UniRef100_A7Q4X9 Cluster: Chromosome undetermined
           scaffold_51, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_51, whole
           genome shotgun sequence - Vitis vinifera (Grape),
           partial (34%)
          Length = 973

 Score =  254 bits (128), Expect = 7e-67
 Identities = 197/220 (89%)
 Strand = Plus / Plus

                                                                       
Query: 158 ttctactaatcggagtgatatttgcatttttaccaggaatacaacaacatacttcaaata 217
           ||||| |||| |||||| ||||||||||||||||||||| | | || |||| | ||||||
Sbjct: 304 ttctattaattggagtggtatttgcatttttaccaggaagagagcagcatattccaaata 363

                                                                       
Query: 218 cagctgccttttcttctgttattcttagtcttgttttgctaatcattgctgaaataggtc 277
           | || | |||||||||||||||| ||||| |||||||| | ||||||||||| |||||||
Sbjct: 364 ccgcagtcttttcttctgttattgttagtgttgttttggtgatcattgctgatataggtc 423

                                                                       
Query: 278 gaagacgaagccggtccactttgttgagattttatgccattgtatcatctatagcaacac 337
           |||||||||||||||||  ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 424 gaagacgaagccggtccggtttgttgagattttatgccattgcatcatctatagcaacac 483

                                                   
Query: 338 ttcacttgattgcttctcttgctatctggcattccctgcc 377
           |||| ||||||| |||||||||||| ||||||||||||||
Sbjct: 484 ttcaattgattgtttctcttgctatgtggcattccctgcc 523



 Score =  121 bits (61), Expect = 7e-27
 Identities = 70/73 (95%)
 Strand = Plus / Plus

                                                                       
Query: 474 aaggctatctgggattttagcttttcagaaactaggaggtttgatgccactggttttagt 533
           |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| |
Sbjct: 525 aaggctatctgggattttggcttttcggaaactaggaggtttgatgccactggttttact 584

                        
Query: 534 ggtcttcaagctg 546
           |||||||||||||
Sbjct: 585 ggtcttcaagctg 597



 Score = 87.7 bits (44), Expect = 9e-17
 Identities = 80/91 (87%), Gaps = 2/91 (2%)
 Strand = Plus / Plus

                                                                       
Query: 591 tccttccattaaacatttggaagctggtgacaacgataaaaaccgcaacccaaagttctt 650
           ||||||||||||||||| |||||||| |||| |||||||||||   ||||||| ||||||
Sbjct: 851 tccttccattaaacattgggaagctgatgactacgataaaaacattaacccaaggttctt 910

                                          
Query: 651 cagcgaaccc--tgctgtggaattttgaatt 679
           ||||||||||   |||||| |||||||||||
Sbjct: 911 cagcgaacccatggctgtgtaattttgaatt 941



 Score = 81.8 bits (41), Expect = 6e-15
 Identities = 53/57 (92%)
 Strand = Plus / Plus

                                                                    
Query: 61  ggtatcaactggttgcaaagggcaagatgcgcctctctctgctatttctcattgagg 117
           |||||||||||||||||||||| ||||  |||||||||||||||||| |||||||||
Sbjct: 241 ggtatcaactggttgcaaaggggaagaaacgcctctctctgctatttatcattgagg 297