Miyakogusa Predicted Gene
- Lj3g3v1531170.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v1531170.2 Non Chatacterized Hit- tr|D7T0B0|D7T0B0_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,74.58,0,"Winged
helix" DNA-binding domain,NULL; DDRGK,DDRGK domain containing protein;
seg,NULL; coiled-coil,CUFF.42775.2
(900 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC74520 similar to UniRef100_A7P0W3 Cluster: Chromosome... 1784 0.0
gnl|LJGI|FS324658 weakly similar to UniRef100_A7P0W3 Cluster: Ch... 430 e-120
gnl|LJGI|FS351081 similar to UniRef100_A7P0W3 Cluster: Chromosom... 416 e-115
gnl|LJGI|TC77099 similar to UniRef100_A7Q3P6 Cluster: Chromosome... 198 4e-50
gnl|LJGI|TC66101 weakly similar to UniRef100_A7PXB3 Cluster: Chr... 78 1e-13
>gnl|LJGI|TC74520 similar to UniRef100_A7P0W3 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (90%)
Length = 1216
Score = 1784 bits (900), Expect = 0.0
Identities = 900/900 (100%)
Strand = Plus / Plus
Query: 1 atggaggaactactcgtagctgtactctcgattctcctgctgggagcactgatcccactc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 atggaggaactactcgtagctgtactctcgattctcctgctgggagcactgatcccactc 184
Query: 61 tatctatggaagcgtcgtcaggattctcaaccctccgctcaccacgacgaacctcaacag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 tatctatggaagcgtcgtcaggattctcaaccctccgctcaccacgacgaacctcaacag 244
Query: 121 gctccacgcagggaaactgtggtgcgcgccaccgcaactcgccgcatgcgtcggagaccg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 gctccacgcagggaaactgtggtgcgcgccaccgcaactcgccgcatgcgtcggagaccg 304
Query: 181 gcggcgtctggagctagcacttcttcagatccacctgcagcgcttcaagattcggcaggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 gcggcgtctggagctagcacttcttcagatccacctgcagcgcttcaagattcggcaggt 364
Query: 241 gaaagcgatgatgaagctggtggtggcgagtcttatgaggctagagcatcaaagaaaaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 gaaagcgatgatgaagctggtggtggcgagtcttatgaggctagagcatcaaagaaaaaa 424
Query: 301 gaaatgaaaaggcaagagagggaagctcggcgacaggctgaagaagctgcgcgagagtca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 gaaatgaaaaggcaagagagggaagctcggcgacaggctgaagaagctgcgcgagagtca 484
Query: 361 aggaattcaaagcaagaccgctatgcagaaatgcgaaggttgaaggatgaagagcgcgag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 aggaattcaaagcaagaccgctatgcagaaatgcgaaggttgaaggatgaagagcgcgag 544
Query: 421 gcgcaggagcgcatgttggaagaggaggccaaggctcggaaggccaaggaggaggaagca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 gcgcaggagcgcatgttggaagaggaggccaaggctcggaaggccaaggaggaggaagca 604
Query: 481 gctgcattagagtttgacaagtggaaaggggaattttcagttgatgatgaaggtaccctt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 gctgcattagagtttgacaagtggaaaggggaattttcagttgatgatgaaggtaccctt 664
Query: 541 gaagatgtgcaggaaaagactgaagacttgctatccaattttgtagaatatatcaagaaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 gaagatgtgcaggaaaagactgaagacttgctatccaattttgtagaatatatcaagaaa 724
Query: 601 cacaaatgtgttcccttagaggaccttgctgcagaatttaaattgcgcactcaggaatgt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 cacaaatgtgttcccttagaggaccttgctgcagaatttaaattgcgcactcaggaatgt 784
Query: 661 atcaatcgcatcacatctctggaaagcatgggtcggctttcgggtgtcatggatgatagg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 785 atcaatcgcatcacatctctggaaagcatgggtcggctttcgggtgtcatggatgatagg 844
Query: 721 ggcaaatttatatacatctcacaagaagagatgaaagctgttgctgattatattaagcgg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 845 ggcaaatttatatacatctcacaagaagagatgaaagctgttgctgattatattaagcgg 904
Query: 781 caagggagggttagcatttcccacttagctagtaaatcaaaccagttcattgatttggag 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 905 caagggagggttagcatttcccacttagctagtaaatcaaaccagttcattgatttggag 964
Query: 841 ccaaaagttgaatacactgaggacataagtaatgtggaggagataactgtcagctgacaa 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 965 ccaaaagttgaatacactgaggacataagtaatgtggaggagataactgtcagctgacaa 1024
>gnl|LJGI|FS324658 weakly similar to UniRef100_A7P0W3 Cluster: Chromosome chr19
scaffold_4, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr19 scaffold_4, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (24%)
Length = 389
Score = 430 bits (217), Expect = e-120
Identities = 226/229 (98%)
Strand = Plus / Plus
Query: 1 atggaggaactactcgtagctgtactctcgattctcctgctgggagcactgatcccactc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 atggaggaactactcgtagctgtactctcgattctcctgctgggagcactgatcccactc 124
Query: 61 tatctatggaagcgtcgtcaggattctcaaccctccgctcaccacgacgaacctcaacag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 tatctatggaagcgtcgtcaggattctcaaccctccgctcaccacgacgaacctcaacag 184
Query: 121 gctccacgcagggaaactgtggtgcgcgccaccgcaactcgccgcatgcgtcggagaccg 180
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 185 gctccacgcagggaaactgtggtgatcgccaccgcaactcgccgcatgcgtcggagaccg 244
Query: 181 gcggcgtctggagctagcacttcttcagatccacctgcagcgcttcaag 229
|||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 gcggcgtcaggagctagcacttcttcagatccacctgcagcgcttcaag 293
>gnl|LJGI|FS351081 similar to UniRef100_A7P0W3 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (22%)
Length = 672
Score = 416 bits (210), Expect = e-115
Identities = 210/210 (100%)
Strand = Plus / Minus
Query: 691 ggtcggctttcgggtgtcatggatgataggggcaaatttatatacatctcacaagaagag 750
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 ggtcggctttcgggtgtcatggatgataggggcaaatttatatacatctcacaagaagag 282
Query: 751 atgaaagctgttgctgattatattaagcggcaagggagggttagcatttcccacttagct 810
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 atgaaagctgttgctgattatattaagcggcaagggagggttagcatttcccacttagct 222
Query: 811 agtaaatcaaaccagttcattgatttggagccaaaagttgaatacactgaggacataagt 870
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 agtaaatcaaaccagttcattgatttggagccaaaagttgaatacactgaggacataagt 162
Query: 871 aatgtggaggagataactgtcagctgacaa 900
||||||||||||||||||||||||||||||
Sbjct: 161 aatgtggaggagataactgtcagctgacaa 132
>gnl|LJGI|TC77099 similar to UniRef100_A7Q3P6 Cluster: Chromosome chr13 scaffold_48,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_48, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (39%)
Length = 573
Score = 198 bits (100), Expect = 4e-50
Identities = 100/100 (100%)
Strand = Plus / Plus
Query: 318 gagggaagctcggcgacaggctgaagaagctgcgcgagagtcaaggaattcaaagcaaga 377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gagggaagctcggcgacaggctgaagaagctgcgcgagagtcaaggaattcaaagcaaga 60
Query: 378 ccgctatgcagaaatgcgaaggttgaaggatgaagagcgc 417
||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ccgctatgcagaaatgcgaaggttgaaggatgaagagcgc 100
>gnl|LJGI|TC66101 weakly similar to UniRef100_A7PXB3 Cluster: Chromosome chr12
scaffold_36, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr12 scaffold_36, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (38%)
Length = 691
Score = 77.8 bits (39), Expect = 1e-13
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 807 agctagtaaatcaaaccagttcattgatttggagccaaaagttgaatacactgaggacat 866
||||||||||| |||||| |||||||||||||||||||||| | | ||| |||||||||
Sbjct: 691 agctagtaaataaaaccaattcattgatttggagccaaaagctcattacggtgaggacat 632
Query: 867 aagtaat 873
|||||||
Sbjct: 631 aagtaat 625