Miyakogusa Predicted Gene
- Lj3g3v1530160.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v1530160.1 Non Chatacterized Hit- tr|I3S4C1|I3S4C1_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=4 SV=1,100,0,no
description,NULL; SUI1,Translation initiation factor SUI1; SUI1_MOF2:
translation initiation fact,CUFF.42779.1
(348 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS337734 homologue to UniRef100_O48650 Cluster: Protein... 690 0.0
gnl|LJGI|TC63862 homologue to UniRef100_O48650 Cluster: Protein ... 690 0.0
gnl|LJGI|BI418765 homologue to UniRef100_O48650 Cluster: Protein... 597 e-170
gnl|LJGI|TC60977 319 6e-87
gnl|LJGI|FS345320 similar to UniRef100_A7P0Q4 Cluster: Chromosom... 74 6e-13
gnl|LJGI|TC66285 similar to UniRef100_A7P0Q4 Cluster: Chromosome... 74 6e-13
gnl|LJGI|TC67552 similar to UniRef100_A7P0Q4 Cluster: Chromosome... 72 2e-12
>gnl|LJGI|FS337734 homologue to UniRef100_O48650 Cluster: Protein translation factor
SUI1 homolog; n=1; Salix bakko|Rep: Protein translation
factor SUI1 homolog - Salix bakko (Japanese willow),
complete
Length = 702
Score = 690 bits (348), Expect = 0.0
Identities = 348/348 (100%)
Strand = Plus / Plus
Query: 1 atgtctgaactagacgcagctattcctactgcctttgatccttttgctgaggcaaatgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 atgtctgaactagacgcagctattcctactgcctttgatccttttgctgaggcaaatgct 123
Query: 61 gaggactctggtgctgggtcatcaaaggagtacgtgcatattcgtatacaacagcggaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 gaggactctggtgctgggtcatcaaaggagtacgtgcatattcgtatacaacagcggaat 183
Query: 121 ggtaggaaaagtttgacaactgtccaaggattgaagaaggagttcagctataacaagatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 ggtaggaaaagtttgacaactgtccaaggattgaagaaggagttcagctataacaagatt 243
Query: 181 cttaaagaccttaagaaggagttctgctgcaatggtacagttgttcaggatccagaacta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 cttaaagaccttaagaaggagttctgctgcaatggtacagttgttcaggatccagaacta 303
Query: 241 ggacaggttattcaacttcaaggtgatcaaaggaagaatgtatctaccttcctagtccag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 ggacaggttattcaacttcaaggtgatcaaaggaagaatgtatctaccttcctagtccag 363
Query: 301 gctggtatcgtgaagaaggagcatattaagattcatggtttctgagct 348
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 gctggtatcgtgaagaaggagcatattaagattcatggtttctgagct 411
>gnl|LJGI|TC63862 homologue to UniRef100_O48650 Cluster: Protein translation factor
SUI1 homolog; n=1; Salix bakko|Rep: Protein translation
factor SUI1 homolog - Salix bakko (Japanese willow),
complete
Length = 731
Score = 690 bits (348), Expect = 0.0
Identities = 348/348 (100%)
Strand = Plus / Plus
Query: 1 atgtctgaactagacgcagctattcctactgcctttgatccttttgctgaggcaaatgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 atgtctgaactagacgcagctattcctactgcctttgatccttttgctgaggcaaatgct 262
Query: 61 gaggactctggtgctgggtcatcaaaggagtacgtgcatattcgtatacaacagcggaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 gaggactctggtgctgggtcatcaaaggagtacgtgcatattcgtatacaacagcggaat 322
Query: 121 ggtaggaaaagtttgacaactgtccaaggattgaagaaggagttcagctataacaagatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ggtaggaaaagtttgacaactgtccaaggattgaagaaggagttcagctataacaagatt 382
Query: 181 cttaaagaccttaagaaggagttctgctgcaatggtacagttgttcaggatccagaacta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 cttaaagaccttaagaaggagttctgctgcaatggtacagttgttcaggatccagaacta 442
Query: 241 ggacaggttattcaacttcaaggtgatcaaaggaagaatgtatctaccttcctagtccag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 ggacaggttattcaacttcaaggtgatcaaaggaagaatgtatctaccttcctagtccag 502
Query: 301 gctggtatcgtgaagaaggagcatattaagattcatggtttctgagct 348
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 gctggtatcgtgaagaaggagcatattaagattcatggtttctgagct 550
>gnl|LJGI|BI418765 homologue to UniRef100_O48650 Cluster: Protein translation factor
SUI1 homolog; n=1; Salix bakko|Rep: Protein translation
factor SUI1 homolog - Salix bakko (Japanese willow),
complete
Length = 544
Score = 597 bits (301), Expect = e-170
Identities = 301/301 (100%)
Strand = Plus / Plus
Query: 1 atgtctgaactagacgcagctattcctactgcctttgatccttttgctgaggcaaatgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 atgtctgaactagacgcagctattcctactgcctttgatccttttgctgaggcaaatgct 199
Query: 61 gaggactctggtgctgggtcatcaaaggagtacgtgcatattcgtatacaacagcggaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 gaggactctggtgctgggtcatcaaaggagtacgtgcatattcgtatacaacagcggaat 259
Query: 121 ggtaggaaaagtttgacaactgtccaaggattgaagaaggagttcagctataacaagatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 ggtaggaaaagtttgacaactgtccaaggattgaagaaggagttcagctataacaagatt 319
Query: 181 cttaaagaccttaagaaggagttctgctgcaatggtacagttgttcaggatccagaacta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 cttaaagaccttaagaaggagttctgctgcaatggtacagttgttcaggatccagaacta 379
Query: 241 ggacaggttattcaacttcaaggtgatcaaaggaagaatgtatctaccttcctagtccag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ggacaggttattcaacttcaaggtgatcaaaggaagaatgtatctaccttcctagtccag 439
Query: 301 g 301
|
Sbjct: 440 g 440
Score = 101 bits (51), Expect = 3e-21
Identities = 51/51 (100%)
Strand = Plus / Plus
Query: 298 caggctggtatcgtgaagaaggagcatattaagattcatggtttctgagct 348
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 caggctggtatcgtgaagaaggagcatattaagattcatggtttctgagct 541
>gnl|LJGI|TC60977
Length = 795
Score = 319 bits (161), Expect = 6e-87
Identities = 306/353 (86%), Gaps = 6/353 (1%)
Strand = Plus / Plus
Query: 1 atgtctgaactagacgcagctattcctactgcctttgatccttttgctgaggcaaatgct 60
||||||||| ||||||| |||||||||||||| |||||||||||||||||||||| |
Sbjct: 185 atgtctgaattagacgctcagattcctactgccttcgatccttttgctgaggcaaatgtt 244
Query: 61 gaggactctggtgctggg--tcat----caaaggagtacgtgcatattcgtatacaacag 114
|| || || ||||||||| | | ||||||| || |||||||| || | || |||
Sbjct: 245 gacgagtcgggtgctgggggtgctgggacaaaggactatgtgcatatccgcgtgcagcag 304
Query: 115 cggaatggtaggaaaagtttgacaactgtccaaggattgaagaaggagttcagctataac 174
||||||| |||||||| |||||||||| || ||||||||||| || ||||||||||||
Sbjct: 305 aggaatggcaggaaaagcctgacaactgttcagggattgaagaaagaattcagctataac 364
Query: 175 aagattcttaaagaccttaagaaggagttctgctgcaatggtacagttgttcaggatcca 234
||||| || || ||||||||||| |||||||| ||||||||||||||||||||||| |||
Sbjct: 365 aagatactgaaggaccttaagaaagagttctgttgcaatggtacagttgttcaggaccca 424
Query: 235 gaactaggacaggttattcaacttcaaggtgatcaaaggaagaatgtatctaccttccta 294
||||| ||||||||||| ||||||||||||||||| |||||||||| ||||||||||||
Sbjct: 425 gaacttggacaggttatccaacttcaaggtgatcagcggaagaatgtttctaccttccta 484
Query: 295 gtccaggctggtatcgtgaagaaggagcatattaagattcatggtttctgagc 347
|||||||||||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 485 gtccaggctggtatcgtgaagaaggataatatcaagattcatggtttctgagc 537
>gnl|LJGI|FS345320 similar to UniRef100_A7P0Q4 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), complete
Length = 709
Score = 73.8 bits (37), Expect = 6e-13
Identities = 55/61 (90%)
Strand = Plus / Minus
Query: 152 tgaagaaggagttcagctataacaagattcttaaagaccttaagaaggagttctgctgca 211
|||||||||||||||||||| | ||||| || || ||||| |||||||||||||||||||
Sbjct: 474 tgaagaaggagttcagctatgagaagatcctcaaggacctcaagaaggagttctgctgca 415
Query: 212 a 212
|
Sbjct: 414 a 414
>gnl|LJGI|TC66285 similar to UniRef100_A7P0Q4 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), complete
Length = 649
Score = 73.8 bits (37), Expect = 6e-13
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 152 tgaagaaggagttcagctataacaagattcttaaagaccttaagaaggagttctgctgca 211
|||||||||||||||||||| | ||||| || || ||||| |||||||||||||||||||
Sbjct: 201 tgaagaaggagttcagctatgagaagatcctcaaggacctcaagaaggagttctgctgca 260
Query: 212 a 212
|
Sbjct: 261 a 261
>gnl|LJGI|TC67552 similar to UniRef100_A7P0Q4 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), complete
Length = 565
Score = 71.9 bits (36), Expect = 2e-12
Identities = 105/128 (82%)
Strand = Plus / Plus
Query: 85 aaggagtacgtgcatattcgtatacaacagcggaatggtaggaaaagtttgacaactgtc 144
|||||||| |||||||| || || || || ||||||| | |||||| ||||| || ||
Sbjct: 167 aaggagtatgtgcatatacgcattcagcaaaggaatggaaagaaaagcttgaccacagtg 226
Query: 145 caaggattgaagaaggagttcagctataacaagattcttaaagaccttaagaaggagttc 204
||||| ||||||||||||||||||| | ||||| || || || ||||||||||||||
Sbjct: 227 caagggctgaagaaggagttcagctacgagaagatcctcaaggatcttaagaaggagttt 286
Query: 205 tgctgcaa 212
||||||||
Sbjct: 287 tgctgcaa 294