Miyakogusa Predicted Gene
- Lj3g3v1527980.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v1527980.1 tr|G7IM44|G7IM44_MEDTR TIR-NBS-LRR type disease
resistance protein OS=Medicago truncatula GN=MTR_2g0,66.61,0,no
description,NULL; NB-ARC,NB-ARC; TIR,Toll/interleukin-1 receptor
homology (TIR) domain; LRR_1,Leu,CUFF.42796.1
(3576 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS343073 weakly similar to UniRef100_A7QHI1 Cluster: Ch... 1354 0.0
gnl|LJGI|DC593321 weakly similar to UniRef100_A7QH95 Cluster: Ch... 1088 0.0
gnl|LJGI|TC80392 weakly similar to UniRef100_A7QGG0 Cluster: Chr... 68 4e-10
gnl|LJGI|BP083746 similar to UniRef100_Q89ZH9 Cluster: TPR domai... 56 2e-06
>gnl|LJGI|FS343073 weakly similar to UniRef100_A7QHI1 Cluster: Chromosome chr5
scaffold_98, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr5 scaffold_98, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (13%)
Length = 827
Score = 1354 bits (683), Expect = 0.0
Identities = 686/687 (99%)
Strand = Plus / Plus
Query: 1 atggactcacgatcaaaatattcagatatgctactctcttggggatcatggctcttgcgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111 atggactcacgatcaaaatattcagatatgctactctcttggggatcatggctcttgcgg 170
Query: 61 ccgttttggtccctggtgagtcgtcggcattcttcccaccacctgggtccgttggcccag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 ccgttttggtccctggtgagtcgtcggcattcttcccaccacctgggtccgttggcccag 230
Query: 121 gggggaagcacagcttccagttccaccacagtcttttccaacggagcacgacgctacaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 gggggaagcacagcttccagttccaccacagtcttttccaacggagcacgacgctacaaa 290
Query: 181 tacgacgtgttcatcagtttcagaggttctgacactcgcaacacctttgtggatcatctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 tacgacgtgttcatcagtttcagaggttctgacactcgcaacacctttgtggatcatctt 350
Query: 241 tacgcccatctcgtccgaaaaggcattttcgtcttcaaggatgacaagaagctccagaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 tacgcccatctcgtccgaaaaggcattttcgtcttcaaggatgacaagaagctccagaaa 410
Query: 301 ggagagtccatttcagctcagcttctacaagcaattcgaaattcacgagtttctattgtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 ggagagtccatttcagctcagcttctacaagcaattcgaaattcacgagtttctattgtt 470
Query: 361 gttttctcgaaaaattatgctgagtcaaggtggtgtttggatgaaatggctgctattgct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 gttttctcgaaaaattatgctgagtcaaggtggtgtttggatgaaatggctgctattgct 530
Query: 421 gaatgctgtgaagattttaagcaaactgttttccctgttttctatgatgtggatccttct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 gaatgctgtgaagattttaagcaaactgttttccctgttttctatgatgtggatccttct 590
Query: 481 cctgtaagaaaccagaatggggtgtatgaaaatgcctttgttttccacatgctgagattc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 cctgtaagaaaccagaatggggtgtatgaaaatgcctttgttttccacatgctgagattc 650
Query: 541 aaacatgatgcagacagggttgatcgatggaagagagctatgagaagtttggctggatca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 aaacatgatgcagacagggttgatcgatggaagagagctatgagaagtttggctggatca 710
Query: 601 gcaggttgggatgtcaggaataagccagaatttcgagagattgaaaatattgttgaggca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 gcaggttgggatgtcaggaataagccagaatttcgagagattgaaaatattgttgaggca 770
Query: 661 gttatagaagcattgggtcgtaaattt 687
||||||||||||||||||| |||||||
Sbjct: 771 gttatagaagcattgggtcataaattt 797
>gnl|LJGI|DC593321 weakly similar to UniRef100_A7QH95 Cluster: Chromosome chr18
scaffold_96, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr18 scaffold_96, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (11%)
Length = 553
Score = 1088 bits (549), Expect = 0.0
Identities = 552/553 (99%)
Strand = Plus / Plus
Query: 1601 tgcacgaaatggtacaagatttggggaagaaaattgttcggcaacaatttcccgaagaac 1660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgcacgaaatggtacaagatttggggaagaaaattgttcggcaacaatttcccgaagaac 60
Query: 1661 caggatcgtggagtagattgtggctttatcagcattttcatcatgtcttgatgtcagaaa 1720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 caggatcgtggagtagattgtggctttatcagcattttcatcatgtcttgatgtcagaaa 120
Query: 1721 tgggaacgaacaaggttaaagccatagttctagatcaaaatgaggatatttccgagtacc 1780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgggaacgaacaaggttaaagccatagttctagatcaaaatgaggatatttccgagtacc 180
Query: 1781 ctcagttgagggctgaaggattgtcaataatgaggggccttataattcttatattacatc 1840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ctcagttgagggctgaaggattgtcaataatgaggggccttataattcttatattacatc 240
Query: 1841 atcagaacttttcaggaagcctccattttctttctaacaacttgcagtatcttctgtggc 1900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atcagaacttttcaggaagcctccattttctttctaacaacttgcagtatcttctgtggc 300
Query: 1901 atggttatccttttgcttctttgccttcaaactttgagccatttcgtcttgttgaattga 1960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atggttatccttttgcttctttgccttcaaactttgagccatttcgtcttgttgaattga 360
Query: 1961 atatgccttatagtagcatccaacgactatgggaaggccgcaaggatctcccatttttga 2020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 atatgccttatagtagcatccaacgactatgggaaggccgcaaggatctcccatttttga 420
Query: 2021 aaaggatggatctgagcaactccaagtatctcacggagacccccaattttgaaggaagca 2080
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aaaagatggatctgagcaactccaagtatctcacggagacccccaattttgaaggaagca 480
Query: 2081 gaagacttgagaggctagatcttacaggatgcacaaacctattgcaggtccatccatcaa 2140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gaagacttgagaggctagatcttacaggatgcacaaacctattgcaggtccatccatcaa 540
Query: 2141 ttggacttcttac 2153
|||||||||||||
Sbjct: 541 ttggacttcttac 553
>gnl|LJGI|TC80392 weakly similar to UniRef100_A7QGG0 Cluster: Chromosome undetermined
scaffold_92, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_92, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(7%)
Length = 975
Score = 67.9 bits (34), Expect = 4e-10
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 2748 agggggaagatattttagaacactatccggatctcataatcataggtcaggattatatat 2807
|||||||||||||| | |||| ||| | ||||| | |||||||||| |||||||||||
Sbjct: 215 agggggaagatattatgaaacaacatctgaatctcgtgatcataggtccggattatatat 274
Query: 2808 tttcaactgtccca 2821
||||||||||||||
Sbjct: 275 tttcaactgtccca 288
Score = 61.9 bits (31), Expect = 3e-08
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 3102 tcctttgtatctttcttttgaaagtgaacacacggaaga 3140
|||||| |||||||| |||||||||||||||||||||||
Sbjct: 650 tcctttttatctttcctttgaaagtgaacacacggaaga 688
>gnl|LJGI|BP083746 similar to UniRef100_Q89ZH9 Cluster: TPR domain-containing protein;
n=1; Bacteroides thetaiotaomicron|Rep: TPR, partial (1%)
Length = 451
Score = 56.0 bits (28), Expect = 2e-06
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 3548 catctactatcaaatatgggatttagat 3575
||||||||||||||||||||||||||||
Sbjct: 8 catctactatcaaatatgggatttagat 35