Miyakogusa Predicted Gene
- Lj3g3v1527850.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v1527850.1 CUFF.42760.1
(411 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC76271 626 e-179
gnl|LJGI|DC595799 similar to UniRef100_A1TKC4 Cluster: Cell divi... 230 5e-60
gnl|LJGI|BW597915 similar to UniRef100_A0KJ55 Cluster: NADH-quin... 196 7e-50
gnl|LJGI|DC599683 111 3e-24
gnl|LJGI|TC70338 similar to UniRef100_A7Q6E5 Cluster: Chromosome... 111 3e-24
gnl|LJGI|BP054144 similar to UniRef100_A7Q6E5 Cluster: Chromosom... 84 8e-16
gnl|LJGI|BP055826 76 2e-13
gnl|LJGI|TC74907 similar to UniRef100_O41608 Cluster: Envelope g... 76 2e-13
gnl|LJGI|BP044021 62 3e-09
gnl|LJGI|FS329273 homologue to UniRef100_Q6MIB0 Cluster: Thiol:d... 58 4e-08
gnl|LJGI|TC70822 52 3e-06
gnl|LJGI|TC69467 similar to UniRef100_A7PCD0 Cluster: Chromosome... 52 3e-06
>gnl|LJGI|TC76271
Length = 702
Score = 626 bits (316), Expect = e-179
Identities = 367/389 (94%)
Strand = Plus / Plus
Query: 1 atgaaaggaaacaacaggatagcaagagttttttggccagttttggtgaaacttttgcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 atgaaaggaaacaacaggatagcaagagttttttggccagttttggtgaaacttttgcag 373
Query: 61 ggggtagtagagaaaaaacttcatctcctgaagcattccacaaaaagcataaccgtggag 120
|||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 374 ggggtagtagagaaaaaactccatctcttgaagcattccacaaaaagcataaccgtggag 433
Query: 121 atgatcaggaagtggggttcctggcggcatagacaaccatgttcctgcaagagcctgtca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 atgatcaggaagtggggttcctggcggcatagacaaccatgttcctgcaagagcctgtca 493
Query: 181 aatatgaagatggaaagaagaaggttcactttactctcnnnnnnnnnnnnnnnctcccct 240
|||||| ||||||||||||||||||||||||||||||| |||||||
Sbjct: 494 aatatggagatggaaagaagaaggttcactttactctcttttttgttttttttctcccct 553
Query: 241 aaatgttgcacagaaacatggttgacattttcacttaagctatcagctgtaatcaggttg 300
|||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct: 554 aaatgttgaacagaaacatggttgacattttcacttaagctatcggttgtaatcaggttg 613
Query: 301 gttatacttttagcagaactatcatggctgtacatgtatctaattttttgcagattaagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 gttatacttttagcagaactatcatggctgtacatgtatctaattttttgcagattaagt 673
Query: 361 tttgcattgttgtcttatatattgatatc 389
|||||| ||||||||||||||||||||||
Sbjct: 674 tttgcactgttgtcttatatattgatatc 702
>gnl|LJGI|DC595799 similar to UniRef100_A1TKC4 Cluster: Cell division protein FtsL
precursor; n=1; Acidovorax avenae subsp. citrulli
AAC00-1|Rep: Cell division protein FtsL precursor -
Acidovorax avenae subsp. citrulli (strain AAC00-1),
partial (15%)
Length = 388
Score = 230 bits (116), Expect = 5e-60
Identities = 279/336 (83%), Gaps = 8/336 (2%)
Strand = Plus / Plus
Query: 83 atctcctgaagcattccacaaaaagcataaccgtggagatgatcaggaagtggggttcct 142
||||||||||||||||||||||| ||||||| |||| |||||||||||||||||||| |
Sbjct: 13 atctcctgaagcattccacaaaa-gcataactgtggtgatgatcaggaagtggggtttcc 71
Query: 143 ggcggcatagacaaccatgttcctgcaagagcctgtcaaatatgaagatggaaagaagaa 202
||| ||||||||||||||| ||||||||||||||| ||||| || | || ||| |||||
Sbjct: 72 ggcagcatagacaaccatgctcctgcaagagcctgccaaatttggcggtgaaaaaaagaa 131
Query: 203 ggttcactttactctcnnnnnnnnnnnnnnn-----ctcccctaaatgttgcacagaaac 257
|||| |||||||||| ||||||||||| ||| ||| | |
Sbjct: 132 tgttcgctttactctcgggggttgttttttatttttctcccctaaattttgaacaacagc 191
Query: 258 atggttgacattttcacttaagctatcagctgtaatcaggttggttatacttttagcaga 317
|||||||||||||||| |||||||||| ||||||||||||||||||| ||||||||||
Sbjct: 192 tgggttgacattttcactaaagctatcagttgtaatcaggttggttatatttttagcaga 251
Query: 318 --actatcatggctgtacatgtatctaattttttgcagattaagttttgcattgttgtct 375
|||||||||| ||||||||||| |||||||| ||||||||||||| | | ||||||||
Sbjct: 252 tcactatcatggttgtacatgtatgtaatttttagcagattaagtttggtactgttgtct 311
Query: 376 tatatattgatatcaattctttattataagaagtaa 411
||||||||| ||||||||||||||||| |||||||
Sbjct: 312 tatatattggcatcaattctttattatatgaagtaa 347
>gnl|LJGI|BW597915 similar to UniRef100_A0KJ55 Cluster: NADH-quinone oxidoreductase
chain n; n=1; Aeromonas hydrophila subsp. hydrophila
ATCC 7966|Rep: NADH-quinone oxidoreductase chain n -
Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966
/ NCIB 9240), partial (4%)
Length = 479
Score = 196 bits (99), Expect = 7e-50
Identities = 105/107 (98%)
Strand = Plus / Plus
Query: 1 atgaaaggaaacaacaggatagcaagagttttttggccagttttggtgaaacttttgcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 atgaaaggaaacaacaggatagcaagagttttttggccagttttggtgaaacttttgcag 432
Query: 61 ggggtagtagagaaaaaacttcatctcctgaagcattccacaaaaag 107
|||||||||||||||||||| |||||| |||||||||||||||||||
Sbjct: 433 ggggtagtagagaaaaaactccatctcttgaagcattccacaaaaag 479
>gnl|LJGI|DC599683
Length = 580
Score = 111 bits (56), Expect = 3e-24
Identities = 86/96 (89%)
Strand = Plus / Plus
Query: 69 agagaaaaaacttcatctcctgaagcattccacaaaaagcataaccgtggagatgatcag 128
||||||||||| |||| |||||||||||||||||| ||||| ||||||||||||||
Sbjct: 240 agagaaaaaacactatctattgaagcattccacaaaaatcataattgtggagatgatcag 299
Query: 129 gaagtggggttcctggcggcatagacaaccatgttc 164
|||||||||||||| || ||||||||||||||||||
Sbjct: 300 gaagtggggttcctagcagcatagacaaccatgttc 335
Score = 97.6 bits (49), Expect = 5e-20
Identities = 91/105 (86%)
Strand = Plus / Plus
Query: 234 ctcccctaaatgttgcacagaaacatggttgacattttcacttaagctatcagctgtaat 293
||||||||||||||| ||| | | |||||||||||||||| |||||||||| | ||||
Sbjct: 476 ctcccctaaatgttgaacaacagctaggttgacattttcactaaagctatcagttataat 535
Query: 294 caggttggttatacttttagcagaactatcatggctgtacatgta 338
||||||| | ||| ||||||| ||| |||||||||||||||||||
Sbjct: 536 caggttgatcatatttttagctgaattatcatggctgtacatgta 580
>gnl|LJGI|TC70338 similar to UniRef100_A7Q6E5 Cluster: Chromosome chr11 scaffold_56,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_56, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (7%)
Length = 539
Score = 111 bits (56), Expect = 3e-24
Identities = 71/76 (93%)
Strand = Plus / Plus
Query: 89 tgaagcattccacaaaaagcataaccgtggagatgatcaggaagtggggttcctggcggc 148
|||||||||||||||||| ||||| |||||||||||||||||||||||||||| || ||
Sbjct: 1 tgaagcattccacaaaaatcataattgtggagatgatcaggaagtggggttcctagcagc 60
Query: 149 atagacaaccatgttc 164
||||||||||||||||
Sbjct: 61 atagacaaccatgttc 76
>gnl|LJGI|BP054144 similar to UniRef100_A7Q6E5 Cluster: Chromosome chr11 scaffold_56,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_56, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (7%)
Length = 484
Score = 83.8 bits (42), Expect = 8e-16
Identities = 48/50 (96%)
Strand = Plus / Minus
Query: 115 gtggagatgatcaggaagtggggttcctggcggcatagacaaccatgttc 164
|||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 475 gtggagatgatcaggaagtggggttcctagcagcatagacaaccatgttc 426
>gnl|LJGI|BP055826
Length = 544
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 96 ttccacaaaaagcataaccgtggagatgatcaggaagtggggttcctggcggcatagaca 155
||||||||||||||||| ||| ||||||| |||||||||||||| ||| ||||||||||
Sbjct: 297 ttccacaaaaagcataatagtgaagatgattaggaagtggggttcttggtggcatagaca 356
Query: 156 ac 157
||
Sbjct: 357 ac 358
>gnl|LJGI|TC74907 similar to UniRef100_O41608 Cluster: Envelope glycoprotein; n=1;
Human immunodeficiency virus 1|Rep: Envelope
glycoprotein - Human immunodeficiency virus 1, partial
(4%)
Length = 555
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 96 ttccacaaaaagcataaccgtggagatgatcaggaagtggggttcctggcggcatagaca 155
||||||||||||||||| ||| ||||||| |||||||||||||| ||| ||||||||||
Sbjct: 258 ttccacaaaaagcataatagtgaagatgattaggaagtggggttcttggtggcatagaca 199
Query: 156 ac 157
||
Sbjct: 198 ac 197
>gnl|LJGI|BP044021
Length = 450
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 260 ggttgacattttcacttaagctatcagctgtaatcaggt 298
|||||||||||||||| |||||||||| |||||||||||
Sbjct: 443 ggttgacattttcactaaagctatcagttgtaatcaggt 405
>gnl|LJGI|FS329273 homologue to UniRef100_Q6MIB0 Cluster: Thiol:disulfide interchange
protein; n=1; Bdellovibrio bacteriovorus|Rep:
Thiol:disulfide, partial (2%)
Length = 763
Score = 58.0 bits (29), Expect = 4e-08
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 83 atctcctgaagcattccacaaaaagcataaccgtggagatgatcaggaagtggggtt 139
||||| |||||| ||||||| ||||||||| ||||||||||| |||||||| ||||
Sbjct: 159 atctcttgaagccttccacagaaagcataatagtggagatgattaggaagtgaggtt 103
>gnl|LJGI|TC70822
Length = 541
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 115 gtggagatgatcaggaagtggggttcctgg 144
||||||||||||||||||||||| ||||||
Sbjct: 94 gtggagatgatcaggaagtgggggtcctgg 123
>gnl|LJGI|TC69467 similar to UniRef100_A7PCD0 Cluster: Chromosome chr2 scaffold_11,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_11, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (89%)
Length = 1149
Score = 52.0 bits (26), Expect = 3e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 83 atctcctgaagcattccacaaaaagcataaccgtggagatgatcag 128
||||||||||||||| ||| |||||||||| ||||||| ||||||
Sbjct: 275 atctcctgaagcatttcacgaaaagcataatagtggagaggatcag 230