Miyakogusa Predicted Gene
- Lj3g3v1517520.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v1517520.1 CUFF.42738.1
(2577 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC64763 similar to UniRef100_A7PJL2 Cluster: Chromosome... 1332 0.0
gnl|LJGI|TC67088 similar to UniRef100_A7QDG5 Cluster: Chromosome... 955 0.0
gnl|LJGI|AV406808 833 0.0
gnl|LJGI|TC60816 similar to UniRef100_Q2TSD5 Cluster: Trehalose ... 58 3e-07
>gnl|LJGI|TC64763 similar to UniRef100_A7PJL2 Cluster: Chromosome chr12 scaffold_18,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_18, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (27%)
Length = 832
Score = 1332 bits (672), Expect = 0.0
Identities = 672/672 (100%)
Strand = Plus / Plus
Query: 1906 agtggacggggaagggatagcttaagcgactggtttatcccctgcaaaaaacttggaatt 1965
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agtggacggggaagggatagcttaagcgactggtttatcccctgcaaaaaacttggaatt 60
Query: 1966 gctgcagaacatgggtacttcttgagatggtccgagagtgaagaatgggaaattttaggt 2025
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gctgcagaacatgggtacttcttgagatggtccgagagtgaagaatgggaaattttaggt 120
Query: 2026 aagtgcactgaatttggatggatgcagattgcgcaacctgtaatgaaactatatacagag 2085
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aagtgcactgaatttggatggatgcagattgcgcaacctgtaatgaaactatatacagag 180
Query: 2086 gcaaccgatggttccagcattgaacggaaggaaagtgctttggtctggcaataccgggat 2145
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gcaaccgatggttccagcattgaacggaaggaaagtgctttggtctggcaataccgggat 240
Query: 2146 gcagaccttggttttggatctgctcaggctaaggaaatgttagatcatctagaaagtgtt 2205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gcagaccttggttttggatctgctcaggctaaggaaatgttagatcatctagaaagtgtt 300
Query: 2206 ttggccaatgagcctgttgctgtgaagagtggccagtttattgttgaagtgaagcctcag 2265
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttggccaatgagcctgttgctgtgaagagtggccagtttattgttgaagtgaagcctcag 360
Query: 2266 gatgtgagcaaaggcttagttgctgaaaagatattctcatcaatggctgggaatggcaaa 2325
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gatgtgagcaaaggcttagttgctgaaaagatattctcatcaatggctgggaatggcaaa 420
Query: 2326 ccagctgactttgtgctttgtgttggtgatgacagatcagatgaggacatgtttgaaata 2385
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ccagctgactttgtgctttgtgttggtgatgacagatcagatgaggacatgtttgaaata 480
Query: 2386 gttaggagtgcaatctcaagaaatattctttcccccaatgcttctgtatttgcttgcacg 2445
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gttaggagtgcaatctcaagaaatattctttcccccaatgcttctgtatttgcttgcacg 540
Query: 2446 gttggacaaaaaccaagcaaagcaaagtattatctggatgatacctttgaagtaataaac 2505
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gttggacaaaaaccaagcaaagcaaagtattatctggatgatacctttgaagtaataaac 600
Query: 2506 atgctagaatctttggcggaagaatcagattcttctccttacatagaagaaactggggat 2565
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 atgctagaatctttggcggaagaatcagattcttctccttacatagaagaaactggggat 660
Query: 2566 tcctcttgaagg 2577
||||||||||||
Sbjct: 661 tcctcttgaagg 672
>gnl|LJGI|TC67088 similar to UniRef100_A7QDG5 Cluster: Chromosome chr10 scaffold_81,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_81, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (19%)
Length = 717
Score = 955 bits (482), Expect = 0.0
Identities = 485/486 (99%)
Strand = Plus / Plus
Query: 1 atgatgtcaagatcgtatacaaaccttttagatttggcttctgggaatttcccggccatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232 atgatgtcaagatcgtatacaaaccttttagatttggcttctgggaatttcccggccatg 291
Query: 61 gggcgggagtcaaaggaaagaaggcggatgccgagggttatgagtgtccctgggatagtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 gggcgggagtcaaaggaaagaaggcggatgccgagggttatgagtgtccctgggatagtc 351
Query: 121 tcagagctggatgatgatcaggctgttagtgtttcttctgataatccgtcaactatttct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 tcagagctggatgatgatcaggctgttagtgtttcttctgataatccgtcaactatttct 411
Query: 181 tctgatcgaatgatcattgtagcaaaccagctgcctctgaaagcaaagcggaaagaggac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 tctgatcgaatgatcattgtagcaaaccagctgcctctgaaagcaaagcggaaagaggac 471
Query: 241 aacaaagggtggagtttcagttggaatgaggattccttgcttttacagcttaaggatggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 aacaaagggtggagtttcagttggaatgaggattccttgcttttacagcttaaggatggt 531
Query: 301 ttaccagaagatatggagatcctttatgttgggtctttacgtgttgacattgatccagct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 ttaccagaagatatggagatcctttatgttgggtctttacgtgttgacattgatccagct 591
Query: 361 gaacaggatgacgtttcacagtatttgttggacaagttcaaatgtgtccctacttttcta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 gaacaggatgacgtttcacagtatttgttggacaagttcaaatgtgtccctacttttcta 651
Query: 421 ccccctgatgtgttggataaattctatgatggcttctgtaagaggcagttatggccactt 480
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 652 ccccctgatgtgttggataaattctatgatggcttctgcaagaggcagttatggccactt 711
Query: 481 ttccat 486
||||||
Sbjct: 712 ttccat 717
>gnl|LJGI|AV406808
Length = 420
Score = 833 bits (420), Expect = 0.0
Identities = 420/420 (100%)
Strand = Plus / Plus
Query: 1090 agacaacaccccaaatggcagggaagagctgttctggtccagatagttaatcctccaagg 1149
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agacaacaccccaaatggcagggaagagctgttctggtccagatagttaatcctccaagg 60
Query: 1150 ggtagagggatacacctagaggagatacacactgaaatacaagaaagctgcagcaggatc 1209
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggtagagggatacacctagaggagatacacactgaaatacaagaaagctgcagcaggatc 120
Query: 1210 aacagagtgtttgggcgacctggttatgaacctattgtttttattgataggtcggttcca 1269
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aacagagtgtttgggcgacctggttatgaacctattgtttttattgataggtcggttcca 180
Query: 1270 attgctgaaaaagttgcctactacagcattgctgagtgtgttattgtcacagcagtaagg 1329
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 attgctgaaaaagttgcctactacagcattgctgagtgtgttattgtcacagcagtaagg 240
Query: 1330 gatgggatgaacctaactccttatgaatatattgcttgtagacagggattatctagttct 1389
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gatgggatgaacctaactccttatgaatatattgcttgtagacagggattatctagttct 300
Query: 1390 gaatcaagttccaatgtctacgacgcaaagaagagcatgctggtaatatcagaatttatt 1449
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gaatcaagttccaatgtctacgacgcaaagaagagcatgctggtaatatcagaatttatt 360
Query: 1450 gggtgttctccgtcacttagtggggctatccgtgtcaatccatggaatgttgaagcaact 1509
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gggtgttctccgtcacttagtggggctatccgtgtcaatccatggaatgttgaagcaact 420
>gnl|LJGI|TC60816 similar to UniRef100_Q2TSD5 Cluster: Trehalose 6-phosphate
synthase; n=1; Gossypium hirsutum|Rep: Trehalose
6-phosphate synthase - Gossypium hirsutum (Upland
cotton) (Gossypium mexicanum), partial (35%)
Length = 1057
Score = 58.0 bits (29), Expect = 3e-07
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 589 ataatcaatccagaagatgattatatttggattcatgattatcacttgatggt 641
||||| ||||| || ||||||||| ||||| ||||||| ||||||||||||||
Sbjct: 729 ataataaatcctgatgatgattatgtttgggttcatgactatcacttgatggt 781
Score = 58.0 bits (29), Expect = 3e-07
Identities = 80/97 (82%)
Strand = Plus / Plus
Query: 767 tgaactctgatatcattggattccatacctttgactatgctcgccatttcctttcctgtt 826
|||| |||||| | ||||| || ||||| ||||| ||||||||||| ||||| || || |
Sbjct: 907 tgaattctgatttaattggttttcatacatttgattatgctcgccacttcctctcttgct 966
Query: 827 gcagtcgtatgttgggtttggagtatcagtcaaagag 863
||||| | ||||||||| |||| ||||| || |||||
Sbjct: 967 gcagtagaatgttgggtctggactatcaatctaagag 1003