Miyakogusa Predicted Gene
- Lj3g3v1517390.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v1517390.1 gi|1370149|emb|Z73953.1|.path1.1
(657 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC57476 UniRef100_Q40195 Cluster: Ras-related protein R... 1302 0.0
gnl|LJGI|TC71887 UniRef100_Q40194 Cluster: Ras-related protein R... 579 e-165
gnl|LJGI|TC57268 homologue to UniRef100_Q08149 Cluster: GTP-bind... 165 4e-40
gnl|LJGI|TC62555 homologue to UniRef100_Q08150 Cluster: GTP-bind... 105 3e-22
gnl|LJGI|TC58220 RAB11I [Lotus japonicus] 84 1e-15
gnl|LJGI|BW595035 homologue to UniRef100_Q40192 Cluster: RAB11B;... 66 3e-10
gnl|LJGI|TC69578 similar to UniRef100_A7QWW2 Cluster: Chromosome... 60 2e-08
gnl|LJGI|AU088863 homologue to UniRef100_Q40199 Cluster: RAB11I;... 58 7e-08
gnl|LJGI|TC67995 weakly similar to UniRef100_Q40520 Cluster: Ras... 54 1e-06
>gnl|LJGI|TC57476 UniRef100_Q40195 Cluster: Ras-related protein Rab11E; n=1; Lotus
japonicus|Rep: Ras-related protein Rab11E - Lotus
japonicus, complete
Length = 958
Score = 1302 bits (657), Expect = 0.0
Identities = 657/657 (100%)
Strand = Plus / Plus
Query: 1 atggctgggtacaaagctgatgatgagtacgattacctcttcaagctggttctgattggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 atggctgggtacaaagctgatgatgagtacgattacctcttcaagctggttctgattggc 129
Query: 61 gattctggtgtgggaaaatccaacttgctttcgaggttcaccaggaacgagttcaacttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 gattctggtgtgggaaaatccaacttgctttcgaggttcaccaggaacgagttcaacttg 189
Query: 121 gagtccaaatccaccataggggttgagttcgctaccaaaagcttgaatattgatggcaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 gagtccaaatccaccataggggttgagttcgctaccaaaagcttgaatattgatggcaag 249
Query: 181 gtcatcaaggctcagatttgggatactgctggacaagaaaggtaccgtgccattaccagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 gtcatcaaggctcagatttgggatactgctggacaagaaaggtaccgtgccattaccagt 309
Query: 241 gcttactaccgcggagctgttggcgccttacttgtgtatgacgtaacccgcagtaccaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 gcttactaccgcggagctgttggcgccttacttgtgtatgacgtaacccgcagtaccaca 369
Query: 301 tttgagactgctgggaggtggttgaaggagttaagggatcacaccgacccgaacatcgtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 tttgagactgctgggaggtggttgaaggagttaagggatcacaccgacccgaacatcgtg 429
Query: 361 gtcatgcttatcggaaacaagtcagatcttcgacatcttgttaccgtctccaccgaagat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 gtcatgcttatcggaaacaagtcagatcttcgacatcttgttaccgtctccaccgaagat 489
Query: 421 ggaaaagcttttgcagagaaagagtccctctacttcatggaaacttctgctctggaagca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 ggaaaagcttttgcagagaaagagtccctctacttcatggaaacttctgctctggaagca 549
Query: 481 accaatgtcgaaaacgcattctctgaggttcttactcagatataccgcatagtgagcaag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 accaatgtcgaaaacgcattctctgaggttcttactcagatataccgcatagtgagcaag 609
Query: 541 agagcggttgaggctggtgacagggcaagtacttctgttgttccatcccagggacagaca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 agagcggttgaggctggtgacagggcaagtacttctgttgttccatcccagggacagaca 669
Query: 601 ataaatgtgaacgaagattcttctgttttgaatagatacagatgctgctcaaattag 657
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 ataaatgtgaacgaagattcttctgttttgaatagatacagatgctgctcaaattag 726
>gnl|LJGI|TC71887 UniRef100_Q40194 Cluster: Ras-related protein Rab11D; n=1; Lotus
japonicus|Rep: Ras-related protein Rab11D - Lotus
japonicus, complete
Length = 1340
Score = 579 bits (292), Expect = e-165
Identities = 562/652 (86%)
Strand = Plus / Plus
Query: 1 atggctgggtacaaagctgatgatgagtacgattacctcttcaagctggttctgattggc 60
|||| |||||||| | | ||||| |||||||||||||| ||||||||||||||||| |||
Sbjct: 286 atgggtgggtacagaaccgatgacgagtacgattaccttttcaagctggttctgatcggc 345
Query: 61 gattctggtgtgggaaaatccaacttgctttcgaggttcaccaggaacgagttcaacttg 120
||||||||||| || || ||||||||||| || || ||||||| |||||||||||| |||
Sbjct: 346 gattctggtgtcggcaagtccaacttgctctccagattcaccaagaacgagttcaatttg 405
Query: 121 gagtccaaatccaccataggggttgagttcgctaccaaaagcttgaatattgatggcaag 180
|||||||||||||| || || ||||||||||||||||| | |||||| |||||| ||||
Sbjct: 406 gagtccaaatccactatcggcgttgagttcgctaccaagaccttgaacgttgatgccaag 465
Query: 181 gtcatcaaggctcagatttgggatactgctggacaagaaaggtaccgtgccattaccagt 240
||| | ||||||||||||||||| |||||||| || |||||||||||||||||||| |||
Sbjct: 466 gtcgttaaggctcagatttgggacactgctggtcaggaaaggtaccgtgccattactagt 525
Query: 241 gcttactaccgcggagctgttggcgccttacttgtgtatgacgtaacccgcagtaccaca 300
||||||||||| ||||||||||| ||||||||||| ||||| ||||| ||| | | |||
Sbjct: 526 gcttactaccgaggagctgttggtgccttacttgtctatgatgtaacgcgccgagctaca 585
Query: 301 tttgagactgctgggaggtggttgaaggagttaagggatcacaccgacccgaacatcgtg 360
||||||| ||||| ||||||||||| ||||| || |||||||| ||||| ||||| |||
Sbjct: 586 tttgagaatgctgcaaggtggttgaaagagttgagagatcacacagaccccaacattgtg 645
Query: 361 gtcatgcttatcggaaacaagtcagatcttcgacatcttgttaccgtctccaccgaagat 420
||||||||||| ||||| ||||| ||||||||||| |||||| | ||| | || ||||||
Sbjct: 646 gtcatgcttattggaaataagtcggatcttcgacaccttgttgctgtcccaacagaagat 705
Query: 421 ggaaaagcttttgcagagaaagagtccctctacttcatggaaacttctgctctggaagca 480
|||||| ||||||| |||| ||||| |||||||||||||| ||||||||| ||||||||
Sbjct: 706 ggaaaatcttttgccgagagggagtcactctacttcatggagacttctgctttggaagca 765
Query: 481 accaatgtcgaaaacgcattctctgaggttcttactcagatataccgcatagtgagcaag 540
|||||||| ||||| |||||| |||||||||||||||||||||| |||||||||||||||
Sbjct: 766 accaatgttgaaaatgcattcactgaggttcttactcagatatatcgcatagtgagcaag 825
Query: 541 agagcggttgaggctggtgacagggcaagtacttctgttgttccatcccagggacagaca 600
||||| ||||| ||||| ||||| | ||| | || | | |||||| | |||||||||
Sbjct: 826 agagcagttgaagctggcgacagtggcagttcctcaggactcccatccaaaggacagaca 885
Query: 601 ataaatgtgaacgaagattcttctgttttgaatagatacagatgctgctcaa 652
||||| ||||| || |||||||| |||||||| |||| ||||||||||||
Sbjct: 886 ataaacgtgaaagaggattcttcagttttgaagagatttggatgctgctcaa 937
>gnl|LJGI|TC57268 homologue to UniRef100_Q08149 Cluster: GTP-binding protein; n=1;
Pisum sativum|Rep: GTP-binding protein - Pisum sativum
(Garden pea), complete
Length = 1234
Score = 165 bits (83), Expect = 4e-40
Identities = 233/283 (82%)
Strand = Plus / Plus
Query: 9 gtacaaagctgatgatgagtacgattacctcttcaagctggttctgattggcgattctgg 68
||||| |||||||||||| |||||||| || |||||| |||| ||||||| || || ||
Sbjct: 225 gtacagagctgatgatgattacgattatctgttcaaggtggtgttgattggggactcagg 284
Query: 69 tgtgggaaaatccaacttgctttcgaggttcaccaggaacgagttcaacttggagtccaa 128
||||||||||||||| | ||||| |||||||||| ||| ||||||| | | || |||||
Sbjct: 285 tgtgggaaaatccaatcttctttcaaggttcaccaagaatgagttcagccttgaatccaa 344
Query: 129 atccaccataggggttgagttcgctaccaaaagcttgaatattgatggcaaggtcatcaa 188
|||||||| |||||||| || || |||| |||| | | |||||| ||||| ||||
Sbjct: 345 gtccaccattggggttgaatttgccaccagaagcattagggttgatgataaggttgtcaa 404
Query: 189 ggctcagatttgggatactgctggacaagaaaggtaccgtgccattaccagtgcttacta 248
|||||| ||||||||||||||||| |||||||||||||| || || || ||||| || ||
Sbjct: 405 ggctcaaatttgggatactgctggtcaagaaaggtaccgagcaataacaagtgcatatta 464
Query: 249 ccgcggagctgttggcgccttacttgtgtatgacgtaacccgc 291
|| |||||||||||||| ||||| || ||||| || ||||||
Sbjct: 465 tcgaggagctgttggcgctttactagtctatgatgttacccgc 507
>gnl|LJGI|TC62555 homologue to UniRef100_Q08150 Cluster: GTP-binding protein; n=2;
Vicieae|Rep: GTP-binding protein - Pisum sativum (Garden
pea), complete
Length = 992
Score = 105 bits (53), Expect = 3e-22
Identities = 179/221 (80%)
Strand = Plus / Plus
Query: 28 tacgattacctcttcaagctggttctgattggcgattctggtgtgggaaaatccaacttg 87
||||| |||||||||||| |||||||||| ||||| || || || || || |||||| |
Sbjct: 196 tacgactacctcttcaaggtggttctgatcggcgactccggcgtcgggaagtccaacctc 255
Query: 88 ctttcgaggttcaccaggaacgagttcaacttggagtccaaatccaccataggggttgag 147
|| || |||||||||| |||||||||||| | ||||| || |||||||| || |||||
Sbjct: 256 ctctccaggttcaccaaaaacgagttcaacctcgagtctaagtccaccatcggcgttgaa 315
Query: 148 ttcgctaccaaaagcttgaatattgatggcaaggtcatcaaggctcagatttgggatact 207
||||||||| | ||||||| |||| ||| ||||||||| ||||||| ||||| ||
Sbjct: 316 ttcgctacccgcaccttgaatgttgactccaaagtcatcaagtctcagatctgggacacc 375
Query: 208 gctggacaagaaaggtaccgtgccattaccagtgcttacta 248
||||| ||||| ||||| ||||| || || ||||| |||||
Sbjct: 376 gctggccaagagaggtatcgtgcaatcacgagtgcatacta 416
>gnl|LJGI|TC58220 RAB11I [Lotus japonicus]
Length = 1015
Score = 83.8 bits (42), Expect = 1e-15
Identities = 111/134 (82%)
Strand = Plus / Plus
Query: 19 gatgatgagtacgattacctcttcaagctggttctgattggcgattctggtgtgggaaaa 78
||||| || ||||| ||| | ||||||||||| |||| || || || ||||| || ||
Sbjct: 166 gatgaggactacgactacttgttcaagctggtgttgatcggagactccggtgtcggcaag 225
Query: 79 tccaacttgctttcgaggttcaccaggaacgagttcaacttggagtccaaatccaccata 138
|||||| ||||||| | |||||| ||||||||||||||||||||||||| ||||||||
Sbjct: 226 tccaacctgctttctcgattcacccggaacgagttcaacttggagtccaagtccaccatc 285
Query: 139 ggggttgagttcgc 152
|| ||||| |||||
Sbjct: 286 ggcgttgaattcgc 299
Score = 52.0 bits (26), Expect = 4e-06
Identities = 65/78 (83%)
Strand = Plus / Plus
Query: 315 gaggtggttgaaggagttaagggatcacaccgacccgaacatcgtggtcatgcttatcgg 374
||||||| |||||||| | ||||||||||| || | ||||| || |||||||| | ||
Sbjct: 462 gaggtggctgaaggagcttagggatcacactgatgccaacattgtaatcatgcttgttgg 521
Query: 375 aaacaagtcagatcttcg 392
||||||| ||||||||||
Sbjct: 522 aaacaaggcagatcttcg 539
>gnl|LJGI|BW595035 homologue to UniRef100_Q40192 Cluster: RAB11B; n=1; Lotus
japonicus|Rep: RAB11B - Lotus japonicus, partial (45%)
Length = 462
Score = 65.9 bits (33), Expect = 3e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 173 atggcaaggtcatcaaggctcagatttgggatactgctggacaagaaaggtac 225
||||||| |||||||| || ||||| |||||||||||||| ||||||||||||
Sbjct: 284 atggcaaagtcatcaaagcccagatctgggatactgctggccaagaaaggtac 336
>gnl|LJGI|TC69578 similar to UniRef100_A7QWW2 Cluster: Chromosome chr13 scaffold_210,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_210, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (73%)
Length = 1138
Score = 60.0 bits (30), Expect = 2e-08
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 185 tcaaggctcagatttgggatactgctggacaagaaaggtacc 226
||||||| ||||||||||| |||||||| |||||||||||||
Sbjct: 340 tcaaggcacagatttgggacactgctggtcaagaaaggtacc 381
>gnl|LJGI|AU088863 homologue to UniRef100_Q40199 Cluster: RAB11I; n=1; Lotus
japonicus|Rep: RAB11I - Lotus japonicus, complete
Length = 680
Score = 58.0 bits (29), Expect = 7e-08
Identities = 80/97 (82%)
Strand = Plus / Plus
Query: 185 tcaaggctcagatttgggatactgctggacaagaaaggtaccgtgccattaccagtgctt 244
||||||| || || ||||| || ||||| |||||||| |||||||| || || |||||||
Sbjct: 53 tcaaggcgcaaatctgggacaccgctggtcaagaaagataccgtgcaatcacaagtgctt 112
Query: 245 actaccgcggagctgttggcgccttacttgtgtatga 281
|||| | ||||||||||| || || ||||||||||
Sbjct: 113 actatagaggagctgttggtgcattgattgtgtatga 149
Score = 52.0 bits (26), Expect = 4e-06
Identities = 65/78 (83%)
Strand = Plus / Plus
Query: 315 gaggtggttgaaggagttaagggatcacaccgacccgaacatcgtggtcatgcttatcgg 374
||||||| |||||||| | ||||||||||| || | ||||| || |||||||| | ||
Sbjct: 183 gaggtggctgaaggagcttagggatcacactgatgccaacattgtaatcatgcttgttgg 242
Query: 375 aaacaagtcagatcttcg 392
||||||| ||||||||||
Sbjct: 243 aaacaaggcagatcttcg 260
>gnl|LJGI|TC67995 weakly similar to UniRef100_Q40520 Cluster: Ras-related protein
Rab11C; n=1; Nicotiana tabacum|Rep: Ras-related protein
Rab11C - Nicotiana tabacum (Common tobacco), partial
(34%)
Length = 824
Score = 54.0 bits (27), Expect = 1e-06
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 185 tcaaggctcagatttgggatactgctggacaagaaaggt 223
||||||| ||||||||||| |||||||| ||||||||||
Sbjct: 131 tcaaggcacagatttgggacactgctggtcaagaaaggt 93