Miyakogusa Predicted Gene

Lj3g3v1440180.3

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v1440180.3 Non Chatacterized Hit- tr|G7IJ51|G7IJ51_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,53.06,3e-17,Likely ribonuclease with RNase H
fold.,YqgF/RNase H-like domain; RNAse_H_YqgF: RNAse H domain
protei,CUFF.42649.3
         (717 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC81282 similar to UniRef100_A7PKJ1 Cluster: Chromosome...   299   1e-80
gnl|LJGI|AV426991 similar to UniRef100_A0GYV0 Cluster: Undecapre...   262   3e-69

>gnl|LJGI|TC81282 similar to UniRef100_A7PKJ1 Cluster: Chromosome chr15 scaffold_19,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr15 scaffold_19, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (19%)
          Length = 440

 Score =  299 bits (151), Expect = 1e-80
 Identities = 151/151 (100%)
 Strand = Plus / Plus

                                                                       
Query: 567 tgcctatgctgccatgatggtactggagagatatttctccacttcgggtaaggatactga 626
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   tgcctatgctgccatgatggtactggagagatatttctccacttcgggtaaggatactga 60

                                                                       
Query: 627 acttgttttgccaaagaatctagaactgcaaggaaaactccgaaagggtcctcccaaaga 686
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  acttgttttgccaaagaatctagaactgcaaggaaaactccgaaagggtcctcccaaaga 120

                                          
Query: 687 caatgattttttctcagatgaagattaatca 717
           |||||||||||||||||||||||||||||||
Sbjct: 121 caatgattttttctcagatgaagattaatca 151


>gnl|LJGI|AV426991 similar to UniRef100_A0GYV0 Cluster: Undecaprenyl-phosphate
           galactosephosphotransferase; n=1; Chloroflexus aggregans
           DSM 9485|Rep: Undecaprenyl-phosphate
           galactosephosphotransferase - Chloroflexus aggregans DSM
           9485, partial (4%)
          Length = 401

 Score =  262 bits (132), Expect = 3e-69
 Identities = 146/153 (95%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtggacgaagcaactgctacaggcaccaccaccccataatctcttcctatgttgttca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 atgtggacgaagcaactgctacaggcaccaccaccccataatctcttcctatgttgttca 308

                                                                       
Query: 61  gctccgagtgttccnnnnnnnccatcttttgtgaaactgtgtccgacccagaatgccaaa 120
           ||||||||||||||       |||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gctccgagtgttccaaaaaaaccatcttttgtgaaactgtgtccgacccagaatgccaaa 368

                                            
Query: 121 aatcactacaacagagttaaggcaatctctttg 153
           |||||||||||||||||||||||||||||||||
Sbjct: 369 aatcactacaacagagttaaggcaatctctttg 401