Miyakogusa Predicted Gene

Lj3g3v1438160.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v1438160.1 tr|Q7XUL6|Q7XUL6_ORYSJ OSJNBa0010H02.10 protein
OS=Oryza sativa subsp. japonica GN=OSJNBa0010H02.10
,25.6,1e-18,seg,NULL; ZINC_FINGER_C2H2_1,Zinc finger, C2H2;
zf-C2H2_6,NULL; coiled-coil,NULL; C2H2 and C2HC zinc,CUFF.42639.1
         (1144 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC75956 similar to UniRef100_A7QJE2 Cluster: Chromosome...    56   5e-07

>gnl|LJGI|TC75956 similar to UniRef100_A7QJE2 Cluster: Chromosome chr8 scaffold_106,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr8 scaffold_106, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (53%)
          Length = 987

 Score = 56.0 bits (28), Expect = 5e-07
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                               
Query: 762 tcaagcacttggtggacacagagcgagtcacaagaa 797
           |||||||||||||||||| ||||| |||||||||||
Sbjct: 410 tcaagcacttggtggacatagagcaagtcacaagaa 445