Miyakogusa Predicted Gene
- Lj3g3v1427070.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v1427070.1 tr|G7JIB0|G7JIB0_MEDTR B3 domain-containing
protein OS=Medicago truncatula GN=MTR_4g028130 PE=4 SV=1,83.28,0,B3
DNA binding domain,B3 DNA binding domain; B3,B3 DNA binding domain;
zf-CW,Zinc finger, CW-type; D,CUFF.42638.1
(2727 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC65880 similar to UniRef100_A7QFN8 Cluster: Chromosome... 1108 0.0
gnl|LJGI|TC77208 similar to UniRef100_A7QFN8 Cluster: Chromosome... 700 0.0
gnl|LJGI|AV408482 similar to UniRef100_A7QFN8 Cluster: Chromosom... 537 e-151
gnl|LJGI|TC80498 similar to UniRef100_Q6Z3U3 Cluster: VP1/ABI3 f... 133 6e-30
gnl|LJGI|CN825325 similar to UniRef100_A7NY07 Cluster: Chromosom... 76 1e-12
gnl|LJGI|AV769261 54 5e-06
>gnl|LJGI|TC65880 similar to UniRef100_A7QFN8 Cluster: Chromosome chr8 scaffold_88,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_88, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 669
Score = 1108 bits (559), Expect = 0.0
Identities = 573/580 (98%)
Strand = Plus / Plus
Query: 2148 aggaaaacacaaacctacatgcacctgcaacgtgtgcatgacagttaaacgccggtttaa 2207
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 aggaaaacacaaacctacatgcacctgcaacgtgtgcatgacagttaaacgccggtttaa 61
Query: 2208 aaccttgatgatgcgaaagaagaagcgccaatctgagcgtgaagcagagatggctcagaa 2267
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 aaccttgatgatgcgaaagaagaagcgccaatctgagcgtgaagcagagatggctcagaa 121
Query: 2268 aaatcagctatcttggaggaccaaggatgaatcagaggtagacagcaccgttcaacattt 2327
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 aaatcagctatcttggaggaccaaggatgaatcagaggtagacagcaccgttcaacattt 181
Query: 2328 aactccagttaacggttcagagaatgaaacgcgggtgccaaatgcgttggaatcacggag 2387
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 aactccagttaacggttcagagaatgaaacgcgggtgccaaatgcgttggaatcacggag 241
Query: 2388 tcaagactgcgcggctgaagcttccaannnnnnnaaattagacttgaattgccaacctga 2447
||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 242 tcaagactgcgcggctgaagcttccaagggggggaaattagacttgaattgccaacctga 301
Query: 2448 tcgagaggacacacaagctgggccaaactcagtgagcatgatgggtctacttgaagaagc 2507
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 tcgagaggacacacaagctgggccaaactcagtgagcatgatgggtctacttgaagaagc 361
Query: 2508 aaatctaccgctggagacatacctgaagcaaaacggtcttactagcttgatatcagagca 2567
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 aaatctaccgctggagacatacctgaagcaaaacggtcttactagcttgatatcagagca 421
Query: 2568 gcaaacaaactcagcttcaaatgtgcaggcacagacagccaacgagagtgagggaagaaa 2627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 gcaaacaaactcagcttcaaatgtgcaggcacagacagccaacgagagtgagggaagaaa 481
Query: 2628 caatgaggattgcaatactacttctgcagttcatgaccagcaaagcagtcctgaagagga 2687
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 caatgaggattgcaatactacttctgcagttcatgaccagcaaagcagtcctgaagagga 541
Query: 2688 cagtgagcaagacaaagaccaaaacaactcactcacatga 2727
||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 cagtgagcaagacaaagaccaaaacaactcactcacatga 581
>gnl|LJGI|TC77208 similar to UniRef100_A7QFN8 Cluster: Chromosome chr8 scaffold_88,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_88, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (7%)
Length = 759
Score = 700 bits (353), Expect = 0.0
Identities = 417/433 (96%), Gaps = 4/433 (0%)
Strand = Plus / Minus
Query: 1 atggagtcaaagaggtgtatgaacgtggcgtgtgccgccgcgacgtcggctcgggggcgc 60
|||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||
Sbjct: 445 atggagtcaaagaggtgtatgaacgtggcgtgtgccgccgcgacctcggctcggtggcgc 386
Query: 61 aaaggttgggctctgcgatccggtgaa-ttcgccgatctctgtgataagtgcggttctgc 119
|||| ||||||||||||||||||||| |||||||||||||||||||||| |||||||||
Sbjct: 385 aaagcctgggctctgcgatccggtgaacttcgccgatctctgtgataagtacggttctgc 326
Query: 120 ttatgagcaatcaacatattgtgatatgtttcactcaaaggactctggttggagagaatg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttatgagcaatcaacatattgtgatatgtttcactcaaaggactctggttggagagaatg 266
Query: 180 cacttcttgtggcaagcgtctccattgtggatgtgttgcttctaagtctcagcttcaatt 239
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 265 cacttcttgtggcaagcgtctccattccggatgtgttgcttctaagtctcagcttcaatt 206
Query: 240 gctagatgctggtggtgtatgctgtaaaaactgcacaagtaattcaggacttcaacctat 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gctagatgctggtggtgtatgctgtaaaaactgcacaagtaattcaggacttcaacctat 146
Query: 300 tgcaagtaatgaaaagcctactggatctgggacatcaaaggtaaaaaatgtca-gtgcac 358
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
Sbjct: 145 tgcaagtaatgaaaagcctactggatctgggacatcaaaggtaaaaaatgtcacgtgccc 86
Query: 359 aacagtgcacatctctggctaaccaattaaatgtgaggggtttgcaattagggcattatg 418
| ||||||||||||||||||||||| |||||||||||||||||| ||||||||| |||
Sbjct: 85 accagtgcacatctctggctaaccatctaaatgtgaggggtttgc-attagggca-tatc 28
Query: 419 cagagaatgatgg 431
|||||||||||||
Sbjct: 27 cagagaatgatgg 15
>gnl|LJGI|AV408482 similar to UniRef100_A7QFN8 Cluster: Chromosome chr8 scaffold_88,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_88, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (8%)
Length = 274
Score = 537 bits (271), Expect = e-151
Identities = 271/271 (100%)
Strand = Plus / Plus
Query: 1290 aacacttccgtctaatatgcccaatggttctcattcaagtgaaactacctattctggtgt 1349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 aacacttccgtctaatatgcccaatggttctcattcaagtgaaactacctattctggtgt 63
Query: 1350 ttatgagaatctacctatattaagtggttactctggccttcttcagtcacaaaagggatg 1409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 ttatgagaatctacctatattaagtggttactctggccttcttcagtcacaaaagggatg 123
Query: 1410 ttcagaaactcacctaaacgcattgtctaaaagctggaactcagctggtggtgacatgaa 1469
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 ttcagaaactcacctaaacgcattgtctaaaagctggaactcagctggtggtgacatgaa 183
Query: 1470 ttggcataatattgacatgcccgaaggcaggaaaagagatgggttgcctgtacctcctgt 1529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 ttggcataatattgacatgcccgaaggcaggaaaagagatgggttgcctgtacctcctgt 243
Query: 1530 aatggttcctgagaagaaaagaactcgcaat 1560
|||||||||||||||||||||||||||||||
Sbjct: 244 aatggttcctgagaagaaaagaactcgcaat 274
>gnl|LJGI|TC80498 similar to UniRef100_Q6Z3U3 Cluster: VP1/ABI3 family regulatory
protein-like; n=1; Oryza sativa Japonica Group|Rep:
VP1/ABI3 family regulatory protein-like - Oryza sativa
subsp. japonica (Rice), partial (17%)
Length = 1665
Score = 133 bits (67), Expect = 6e-30
Identities = 232/287 (80%)
Strand = Plus / Plus
Query: 979 agtgcaagtgatgctggtcgaattggccgcttggttctaccaaaagcatgtgctgaagca 1038
||||| |||||||||||||||||||| || | ||||| |||||||| |||||||| ||
Sbjct: 1145 agtgccagtgatgctggtcgaattggtcgtcttgttctcccaaaagcctgtgctgaggct 1204
Query: 1039 tatttccctcctatctctcaacctgagggccttcctttacaaatccaagatgtgaaagga 1098
||||| ||| |||| || || | || || |||||| | || ||||||||||||| ||
Sbjct: 1205 tattttcctactatttcacattccgaaggtcttcctctgcatgtccaagatgtgaagggg 1264
Query: 1099 aaagaatggatgtttcaatttagattttggccaaataataacagcaggatgtatgtttta 1158
|| || |||| ||||| |||||||||||||| ||||| ||||| ||||||||||| ||
Sbjct: 1265 aatgagtggacatttcagtttagattttggcctaataacaacagtaggatgtatgtattg 1324
Query: 1159 gaaggtgtaaccccctgcattcagtccatgcaactgcaagctggagatactgtaacattt 1218
|| ||||| ||||| ||||| ||||||||||| | ||||| |||||||||||||||
Sbjct: 1325 gagggtgtgaccccttgcatacagtccatgcagttatgtgctggtgatactgtaacattt 1384
Query: 1219 agccgcatggaacctgaggggaaacttataatgggtttcaggaaggc 1265
|| || || || |||| || |||||| | ||||||||||| |||||
Sbjct: 1385 agtcggatagaccctggaggcaaacttgttatgggtttcagaaaggc 1431
>gnl|LJGI|CN825325 similar to UniRef100_A7NY07 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (18%)
Length = 541
Score = 75.8 bits (38), Expect = 1e-12
Identities = 83/98 (84%)
Strand = Plus / Plus
Query: 1126 tggccaaataataacagcaggatgtatgttttagaaggtgtaaccccctgcattcagtcc 1185
||||| || ||||||||||| ||||| |||||||| ||||| || || ||||||||||||
Sbjct: 16 tggcccaacaataacagcagaatgtacgttttagagggtgtcactccatgcattcagtcc 75
Query: 1186 atgcaactgcaagctggagatactgtaacatttagccg 1223
||||| | ||||| || || || ||||||||||||||
Sbjct: 76 atgcagttacaagcaggtgacacagtaacatttagccg 113
>gnl|LJGI|AV769261
Length = 313
Score = 54.0 bits (27), Expect = 5e-06
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 2701 aaagaccaaaacaactcactcacatga 2727
|||||||||||||||||||||||||||
Sbjct: 313 aaagaccaaaacaactcactcacatga 287