Miyakogusa Predicted Gene

Lj3g3v1425010.3

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v1425010.3 tr|G7LDZ6|G7LDZ6_MEDTR F-box/FBD/LRR-repeat
protein OS=Medicago truncatula GN=MTR_8g077460 PE=4
SV=1,39.46,1e-17,FBD,FBD; domain in FBox and BRCT domain containing
pl,FBD,CUFF.42627.3
         (498 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC75395                                                      565   e-161
gnl|LJGI|FS353832 similar to UniRef100_Q1HQ78 Cluster: Prolactin...   100   2e-20
gnl|LJGI|BP053442 weakly similar to UniRef100_Q953D6 Cluster: Cy...    62   3e-09

>gnl|LJGI|TC75395 
          Length = 553

 Score =  565 bits (285), Expect = e-161
 Identities = 303/309 (98%)
 Strand = Plus / Plus

                                                                       
Query: 188 tgcttcgacttctcacaattgagaataacaatgaaccatccaaatggggaaaaccaccta 247
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1   tgcttcgacttctcacaattgagaataacaatgaaccatccacatggggaaaaccaccta 60

                                                                       
Query: 248 gggctcctatttttcatcatgtattacacctgacctttattcactataaaggatatcaag 307
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 61  gggctcctatttttcatcatgtattacacctgacctttattcactatcaaggatatcaag 120

                                                                       
Query: 308 gattcactgatgagctagagtttcttgcgtatgttttacgagaaggaattgttttggaga 367
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gattcactgatgagctagagtttcttgcgtatgttttacgagaaggaattgttttggaga 180

                                                                       
Query: 368 gaatgattatatctactgatagatttttagacattcaacagaagaacaaagttctcaaaa 427
           |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||   
Sbjct: 181 gaatgattatatctactgatagatttttagacattcaacagaagcacaaagttctcattc 240

                                                                       
Query: 428 acttattggcattaccaaggtgctccagcatgtgtgaaattaagtttgattgcgctacat 487
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 acttattggcattaccaaggtgctccagcatgtgtgaaattaagtttgattgcgctacat 300

                    
Query: 488 ctccttaag 496
           |||||||||
Sbjct: 301 ctccttaag 309


>gnl|LJGI|FS353832 similar to UniRef100_Q1HQ78 Cluster: Prolactin regulatory
           binding-element protein; n=1; Bombyx mori|Rep: Prolactin
           regulatory, partial (3%)
          Length = 591

 Score = 99.6 bits (50), Expect = 2e-20
 Identities = 101/118 (85%)
 Strand = Plus / Minus

                                                                       
Query: 264 tcatgtattacacctgacctttattcactataaaggatatcaaggattcactgatgagct 323
           |||||||||| ||||| |||  ||||||||||||||||||||||||||   |||||||| 
Sbjct: 541 tcatgtattaaacctggcctccattcactataaaggatatcaaggatttgttgatgagca 482

                                                                     
Query: 324 agagtttcttgcgtatgttttacgagaaggaattgttttggagagaatgattatatct 381
           ||| ||| |||||||||||||||||  | | ||| ||||||||| ||| |||||||||
Sbjct: 481 agactttgttgcgtatgttttacgaagatgtattattttggagacaataattatatct 424


>gnl|LJGI|BP053442 weakly similar to UniRef100_Q953D6 Cluster: Cytochrome c oxidase
           subunit I; n=1; Strongylocotes fimbriatus|Rep:
           Cytochrome c oxidase subunit I - Strongylocotes
           fimbriatus, partial (15%)
          Length = 494

 Score = 61.9 bits (31), Expect = 3e-09
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                      
Query: 438 attaccaaggtgctccagcatgtgtgaaattaagtttgattgcgctacatctccttaag 496
           |||| ||||| ||||||||||||||||| |||| ||||| || |||||| |||||||||
Sbjct: 379 attatcaaggagctccagcatgtgtgaacttaaatttgactgagctacacctccttaag 321