Miyakogusa Predicted Gene

Lj3g3v1425010.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v1425010.1 Non Chatacterized Hit- tr|I3ST10|I3ST10_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,43.62,0.0000000000005,domain in FBox and BRCT domain containing
pl,FBD; FBD,FBD,CUFF.42627.1
         (282 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC75395                                                      502   e-142
gnl|LJGI|FS353832 similar to UniRef100_Q1HQ78 Cluster: Prolactin...   100   9e-21
gnl|LJGI|BP053442 weakly similar to UniRef100_Q953D6 Cluster: Cy...    62   2e-09

>gnl|LJGI|TC75395 
          Length = 553

 Score =  502 bits (253), Expect = e-142
 Identities = 271/277 (97%)
 Strand = Plus / Plus

                                                                       
Query: 4   gaaccatccaaatggggaaaaccacctagggctcctatttttcatcatgtattacacctg 63
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33  gaaccatccacatggggaaaaccacctagggctcctatttttcatcatgtattacacctg 92

                                                                       
Query: 64  acctttattcactataaaggatatcaaggattcactgatgagctagagtttcttgcgtat 123
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93  acctttattcactatcaaggatatcaaggattcactgatgagctagagtttcttgcgtat 152

                                                                       
Query: 124 gttttacgagaaggaattgttttggagagaatgattatatctactgatagatttttagac 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 gttttacgagaaggaattgttttggagagaatgattatatctactgatagatttttagac 212

                                                                       
Query: 184 attcaacagaagaacaaagttctcaaaaacttattggcattaccaaggtgctccagcatg 243
           |||||||||||| ||||||||||||   ||||||||||||||||||||||||||||||||
Sbjct: 213 attcaacagaagcacaaagttctcattcacttattggcattaccaaggtgctccagcatg 272

                                                
Query: 244 tgtgaaattaagtttgattgcgctacatctccttaag 280
           |||||||||||||||||||||||||||||||||||||
Sbjct: 273 tgtgaaattaagtttgattgcgctacatctccttaag 309


>gnl|LJGI|FS353832 similar to UniRef100_Q1HQ78 Cluster: Prolactin regulatory
           binding-element protein; n=1; Bombyx mori|Rep: Prolactin
           regulatory, partial (3%)
          Length = 591

 Score = 99.6 bits (50), Expect = 9e-21
 Identities = 101/118 (85%)
 Strand = Plus / Minus

                                                                       
Query: 48  tcatgtattacacctgacctttattcactataaaggatatcaaggattcactgatgagct 107
           |||||||||| ||||| |||  ||||||||||||||||||||||||||   |||||||| 
Sbjct: 541 tcatgtattaaacctggcctccattcactataaaggatatcaaggatttgttgatgagca 482

                                                                     
Query: 108 agagtttcttgcgtatgttttacgagaaggaattgttttggagagaatgattatatct 165
           ||| ||| |||||||||||||||||  | | ||| ||||||||| ||| |||||||||
Sbjct: 481 agactttgttgcgtatgttttacgaagatgtattattttggagacaataattatatct 424


>gnl|LJGI|BP053442 weakly similar to UniRef100_Q953D6 Cluster: Cytochrome c oxidase
           subunit I; n=1; Strongylocotes fimbriatus|Rep:
           Cytochrome c oxidase subunit I - Strongylocotes
           fimbriatus, partial (15%)
          Length = 494

 Score = 61.9 bits (31), Expect = 2e-09
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                      
Query: 222 attaccaaggtgctccagcatgtgtgaaattaagtttgattgcgctacatctccttaag 280
           |||| ||||| ||||||||||||||||| |||| ||||| || |||||| |||||||||
Sbjct: 379 attatcaaggagctccagcatgtgtgaacttaaatttgactgagctacacctccttaag 321