Miyakogusa Predicted Gene
- Lj3g3v1421820.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v1421820.1 Non Chatacterized Hit- tr|C5XNB4|C5XNB4_SORBI
Putative uncharacterized protein Sb03g038320
OS=Sorghu,48.6,1e-18,A_thal_3678: uncharacterized plant-specific
domain,Ovate protein family, C-terminal; Ovate,Ovate p,CUFF.42616.1
(1204 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67036 similar to UniRef100_A7NY20 Cluster: Chromosome... 833 0.0
gnl|LJGI|TC76577 similar to UniRef100_A7QFM0 Cluster: Chromosome... 533 e-151
gnl|LJGI|TC81940 174 8e-43
gnl|LJGI|TC77863 similar to UniRef100_A7NY20 Cluster: Chromosome... 58 1e-07
>gnl|LJGI|TC67036 similar to UniRef100_A7NY20 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 616
Score = 833 bits (420), Expect = 0.0
Identities = 458/477 (96%)
Strand = Plus / Plus
Query: 1 atggggaattacaggttcaagttatcagacatgattcccaatgcctggttttacaagctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 atggggaattacaggttcaagttatcagacatgattcccaatgcctggttttacaagctg 199
Query: 61 aaagacatggggagagggaacaagcaaacacacactctttccagaaacaagaaacaatcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 aaagacatggggagagggaacaagcaaacacacactctttccagaaacaagaaacaatcc 259
Query: 121 ttaccatcctcaaccacacaatcatcaaaaccaaaacaaacccaccattccaatcccaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 ttaccatcctcaaccacacaatcatcaaaaccaaaacaaacccaccattccaatcccaga 319
Query: 181 aggtcttactatttcacaagagaggttaacccttacccaaccacctacaaacccaacaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 aggtcttactatttcacaagagaggttaacccttacccaaccacctacaaacccaacaat 379
Query: 241 tcccctgaacctgaacctgaaccacccagaaaatcatccaaacagagaaccnnnnnnnnn 300
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tcccctgaacctgaacctgaaccacccagaaaatcatccaaacagagaaccagaagaaga 439
Query: 301 nnnnnnnnnncagcttcttctgctaccccaaagcttgttacctcagcaggttgtaactgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 agaagaagaacagcttcttctgctaccccaaagcttgttacctcagcaggttgtaactgc 499
Query: 361 cgccccaccatcgaatctgtttggatcaaatcgaattccccaccaggacactcttcatct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 cgccccaccatcgaatctgtttggatcaaatcgaattccccaccaggacactcttcatct 559
Query: 421 cattcaccatttgatgatagctctgctgaaacagagtcccctgacccagaattcaga 477
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 cattcaccatttgatgatagctctgctgaaacagagtcccctgacccagaattcaga 616
>gnl|LJGI|TC76577 similar to UniRef100_A7QFM0 Cluster: Chromosome chr8 scaffold_88,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_88, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (18%)
Length = 455
Score = 533 bits (269), Expect = e-151
Identities = 269/269 (100%)
Strand = Plus / Plus
Query: 936 cttaaaggtccacaactactctcatggcaggtcgtcgacgactggctcccggagaagctt 995
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cttaaaggtccacaactactctcatggcaggtcgtcgacgactggctcccggagaagctt 60
Query: 996 ctccggcagctgcgccgtcgtgaagtcgtcgttcaacccgcagaaggatttcagggagtc 1055
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctccggcagctgcgccgtcgtgaagtcgtcgttcaacccgcagaaggatttcagggagtc 120
Query: 1056 aatggtggagatgatcgtgcagaacaacatcagggcgtcgaaggacttggaagatcttct 1115
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aatggtggagatgatcgtgcagaacaacatcagggcgtcgaaggacttggaagatcttct 180
Query: 1116 tgcttgttacctttctctgaattcagaccagtatcatgaactcatcatcaaggtgttcaa 1175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgcttgttacctttctctgaattcagaccagtatcatgaactcatcatcaaggtgttcaa 240
Query: 1176 gcaaatttggtttgatttgacaaggtaga 1204
|||||||||||||||||||||||||||||
Sbjct: 241 gcaaatttggtttgatttgacaaggtaga 269
>gnl|LJGI|TC81940
Length = 187
Score = 174 bits (88), Expect = 8e-43
Identities = 88/88 (100%)
Strand = Plus / Minus
Query: 653 cattttcagagcttgtagaacttcctccaatcataaccaaaacacccaaaatcaacaact 712
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88 cattttcagagcttgtagaacttcctccaatcataaccaaaacacccaaaatcaacaact 29
Query: 713 ttgtgagcgattgcaggaagaaagaacc 740
||||||||||||||||||||||||||||
Sbjct: 28 ttgtgagcgattgcaggaagaaagaacc 1
Score = 139 bits (70), Expect = 5e-32
Identities = 70/70 (100%)
Strand = Plus / Minus
Query: 555 cagagacatcgttatcgatgttgaagggaattctcttgccagaaaagatgacaagcttga 614
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 cagagacatcgttatcgatgttgaagggaattctcttgccagaaaagatgacaagcttga 127
Query: 615 aggctgtgac 624
||||||||||
Sbjct: 126 aggctgtgac 117
>gnl|LJGI|TC77863 similar to UniRef100_A7NY20 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (34%)
Length = 1189
Score = 58.0 bits (29), Expect = 1e-07
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 1042 gatttcagggagtcaatggtggagatgatcgtgcagaacaa 1082
||||||||||| ||||||||||||||||| ||| |||||||
Sbjct: 957 gatttcagggattcaatggtggagatgattgtggagaacaa 997