Miyakogusa Predicted Gene
- Lj3g3v1409680.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v1409680.1 Non Chatacterized Hit- tr|B8A0Y3|B8A0Y3_MAIZE
Uncharacterized protein OS=Zea mays PE=2 SV=1,35.89,1e-17,seg,NULL;
coiled-coil,NULL,NODE_28991_length_879_cov_25.144482.path2.1
(648 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59540 similar to UniRef100_A7P1N5 Cluster: Chromosome... 1269 0.0
gnl|LJGI|FS357411 similar to UniRef100_A7P1N5 Cluster: Chromosom... 301 3e-81
gnl|LJGI|TC74744 similar to UniRef100_A7P1N5 Cluster: Chromosome... 159 3e-38
gnl|LJGI|AV423422 similar to UniRef100_A7P1N5 Cluster: Chromosom... 68 7e-11
>gnl|LJGI|TC59540 similar to UniRef100_A7P1N5 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (44%)
Length = 1266
Score = 1269 bits (640), Expect = 0.0
Identities = 646/648 (99%)
Strand = Plus / Plus
Query: 1 atgcagaagagacaagggaaaacttattcacaaagcaggagtgagaagttcaaccctcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 atgcagaagagacaagggaaaacttattcacaaagcaggagtgagaagttcaaccctcat 439
Query: 61 cctgaagaagttgcatctggatttcccattgacccccctagaccatcacaagctgtggaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 cctgaagaagttgcatctggatttcccattgacccccctagaccatcacaagctgtggaa 499
Query: 121 gtaagtcgggattcccaggtgcatcaacataaaagggcctcccattcaggtccgctgaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gtaagtcgggattcccaggtgcatcaacataaaagggcctcccattcaggtccgctgaat 559
Query: 181 caccgcaatgttgctccaaagatttcaatggggggtgacttaccaacaagctcaggctta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 caccgcaatgttgctccaaagatttcaatggggggtgacttaccaacaagctcaggctta 619
Query: 241 gttgcatccaggaggagtatgttgtctgacaatcgcggagaaacgtctggattgtcacaa 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 620 gttgcatccaggaggagtatgttgtctgacaatcgcggagaaacgtctggattgtcgcaa 679
Query: 301 gcagaggctcctaaactaataacctggttcccaggatccttcaaggacgcctctgaacca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 gcagaggctcctaaactaataacctggttcccaggatccttcaaggacgcctctgaacca 739
Query: 361 ttgacgcgacaggatcagaagcatcatggacatgctcctcagaaggaagaagggagatgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 ttgacgcgacaggatcagaagcatcatggacatgctcctcagaaggaagaagggagatgc 799
Query: 421 agtaaccaagacccaaatcttgttggttatgggtccaagggttataaaattcattattct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 agtaaccaagacccaaatcttgttggttatgggtccaagggttataaaattcattattct 859
Query: 481 ggtccattgctagttccatctagcaacacggatcagatgttgaaagaccatgaccgccaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 860 ggtccattgctagttccatctagcaacacggatcagatgttgaaagaccatgaccaccaa 919
Query: 541 attcaggaggcgggtagaagagctcgactggagaaggcaagaatgagaagacttcaagct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 920 attcaggaggcgggtagaagagctcgactggagaaggcaagaatgagaagacttcaagct 979
Query: 601 caggggaacgacataaccaatattttatttgtttctggtcgttgagct 648
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 980 caggggaacgacataaccaatattttatttgtttctggtcgttgagct 1027
>gnl|LJGI|FS357411 similar to UniRef100_A7P1N5 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (13%)
Length = 538
Score = 301 bits (152), Expect = 3e-81
Identities = 271/310 (87%), Gaps = 3/310 (0%)
Strand = Plus / Minus
Query: 294 gtcacaagcagaggctcctaaactaataacctggttcccaggatccttcaaggacgcctc 353
|||||||||||||||||| |||||||| | | ||||||||||||| |||||||| || ||
Sbjct: 537 gtcacaagcagaggctccaaaactaattagcaggttcccaggatctttcaaggaggcttc 478
Query: 354 tgaaccattgacgcgacaggatcagaagcatcatgg---acatgctcctcagaaggaaga 410
||| | |||| || | ||||||||||||||||| ||||||| |||| || |||||
Sbjct: 477 tgattcgttgatgcaaaaggatcagaagcatcatcatatacatgcttctcaaaatgaaga 418
Query: 411 agggagatgcagtaaccaagacccaaatcttgttggttatgggtccaagggttataaaat 470
||| ||| |||| ||| ||||| ||||||||||||||||||| |||||||||||||||||
Sbjct: 417 aggaagaggcagcaacaaagactcaaatcttgttggttatggatccaagggttataaaat 358
Query: 471 tcattattctggtccattgctagttccatctagcaacacggatcagatgttgaaagacca 530
|||||||||||||||||||||||||||||| | ||||| |||||||||||||||||||||
Sbjct: 357 tcattattctggtccattgctagttccatcaaacaacatggatcagatgttgaaagacca 298
Query: 531 tgaccgccaaattcaggaggcgggtagaagagctcgactggagaaggcaagaatgagaag 590
||| ||||||||||||||||| | ||||||||| || ||||| ||||| | ||||| |||
Sbjct: 297 tgatcgccaaattcaggaggcagttagaagagcgcgtctggacaaggcgaaaatgaaaag 238
Query: 591 acttcaagct 600
||||||||||
Sbjct: 237 acttcaagct 228
>gnl|LJGI|TC74744 similar to UniRef100_A7P1N5 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (7%)
Length = 545
Score = 159 bits (80), Expect = 3e-38
Identities = 147/168 (87%), Gaps = 1/168 (0%)
Strand = Plus / Plus
Query: 434 caaatcttgttggttatgggtccaagggttataaaattcattattctggtccattgctag 493
||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||||
Sbjct: 5 caaatcttgttggttatggatccaagggctatggaattcattattctggtccattgctag 64
Query: 494 ttccatctagcaacacggatcagatgttgaaagaccatgaccgccaaattcaggaggcgg 553
||||||| | ||| |||||||||||||||||||||||| |||| ||||||||||| |
Sbjct: 65 ttccatcccaccacatggatcagatgttgaaagaccatgatcgccctattcaggaggcag 124
Query: 554 gtagaagagctcgactggagaaggc-aagaatgagaagacttcaagct 600
||||||||| || ||||| ||||| | ||||| |||||||||||||
Sbjct: 125 ttagaagagcgcgtctggacaaggcgcaaaatgaaaagacttcaagct 172
>gnl|LJGI|AV423422 similar to UniRef100_A7P1N5 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (16%)
Length = 384
Score = 67.9 bits (34), Expect = 7e-11
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 1 atgcagaagagacaagggaaaacttattcacaaagcaggagtgagaagttcaaccctcat 60
||||||||||||| |||| ||| ||| |||||| ||||||||||||| |||||||||
Sbjct: 313 atgcagaagagacgagggctgactagttctcaaagccggagtgagaagtttaaccctcat 372
Query: 61 cctgaagaag 70
||||||||||
Sbjct: 373 cctgaagaag 382