Miyakogusa Predicted Gene

Lj3g3v1404150.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v1404150.1 Non Chatacterized Hit- tr|J3FKZ0|J3FKZ0_9PSED
Putative deacylase OS=Pseudomonas sp. GM33 PE=3
SV=1,32.91,1.1,seg,NULL,CUFF.42558.1
         (388 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC67847                                                      127   5e-29
gnl|LJGI|TC65360 weakly similar to UniRef100_A8JIF0 Cluster: Cel...    94   8e-19

>gnl|LJGI|TC67847 
          Length = 894

 Score =  127 bits (64), Expect = 5e-29
 Identities = 73/76 (96%)
 Strand = Plus / Minus

                                                                       
Query: 148 gggcgttttgcatgttctgtatcgccggcagtatctggttcacaaggccggtgtcattgg 207
           |||||||||||| |||||||||||||||||| ||||||||||| ||||||||||||||||
Sbjct: 475 gggcgttttgcacgttctgtatcgccggcagcatctggttcacgaggccggtgtcattgg 416

                           
Query: 208 aggttatcacctcgtt 223
           ||||||||||||||||
Sbjct: 415 aggttatcacctcgtt 400


>gnl|LJGI|TC65360 weakly similar to UniRef100_A8JIF0 Cluster: Cell wall protein
           pherophorin-C8; n=1; Chlamydomonas reinhardtii|Rep: Cell
           wall protein pherophorin-C8 - Chlamydomonas reinhardtii,
           partial (6%)
          Length = 767

 Score = 93.7 bits (47), Expect = 8e-19
 Identities = 74/83 (89%)
 Strand = Plus / Minus

                                                                       
Query: 238 attctgatctgtgcaccttcgttaattcctgtggagtaccttgcagatctggggttgcag 297
           |||| |||||| |||||| | |||||||||||||||||||||||||||||||| |||  |
Sbjct: 241 attccgatctgggcacctccattaattcctgtggagtaccttgcagatctgggtttgtgg 182

                                  
Query: 298 aggtgcttgggagttgcgatggc 320
           ||||||| |||||||||| ||||
Sbjct: 181 aggtgctggggagttgcggtggc 159



 Score = 73.8 bits (37), Expect = 7e-13
 Identities = 58/65 (89%)
 Strand = Plus / Minus

                                                                       
Query: 1   atgatgaaacccggtgctgcccctccaccttcatctaccccaaacctaaattcagcctcg 60
           |||||||||||| | |||||| |||| ||||||||| |||||| |||||||| |||||||
Sbjct: 349 atgatgaaacccagcgctgccactcctccttcatcttccccaaccctaaatttagcctcg 290

                
Query: 61  ctgca 65
           |||||
Sbjct: 289 ctgca 285