Miyakogusa Predicted Gene
- Lj3g3v1383560.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v1383560.1 Non Chatacterized Hit- tr|F6VXA3|F6VXA3_CIOIN
Uncharacterized protein (Fragment) OS=Ciona
intestinal,44.9,0.00000001,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; FPN1,Ferroporti-1; MFS general substrate
transporte,gene.g47318.t1.1
(1473 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS341520 similar to UniRef100_A7QFH5 Cluster: Chromosom... 684 0.0
gnl|LJGI|GO023393 similar to UniRef100_A7QFH5 Cluster: Chromosom... 321 7e-87
gnl|LJGI|TC80494 similar to UniRef100_A7QFH5 Cluster: Chromosome... 303 2e-81
>gnl|LJGI|FS341520 similar to UniRef100_A7QFH5 Cluster: Chromosome chr8 scaffold_88,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_88, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (45%)
Length = 796
Score = 684 bits (345), Expect = 0.0
Identities = 504/557 (90%)
Strand = Plus / Plus
Query: 175 tcattgctctatgcagcaatatatggtgctgttgaatctgcctccaccgcagtgtttggt 234
||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 222 tcattgctctatgcagccatatatggtgctgttgaatctgcttccactgcagtgtttggt 281
Query: 235 cctataattggaacatgggttgataagttaacgtatgtgaaggttttgaaactgtggttg 294
|| |||||||||||||| |||||||||| || ||||||||||||||| | ||||||||
Sbjct: 282 cccttaattggaacatggattgataagttcacttatgtgaaggttttgcgattgtggttg 341
Query: 295 gtgatacagaatctctctttcattattgccggggccactgtgtttaccttacttgtctac 354
|||| ||||||||| |||||| |||||||||||| |||||| ||| ||||||| |||||
Sbjct: 342 gtgacacagaatctatctttcgttattgccggggtcactgttgttaacttacttatctac 401
Query: 355 tcatctttgaagtttacttgtttctcagctttcatattgctggtttctataaccaatgtc 414
|||||||||||||| ||| |||||||||||||||||||||||| |||||||| ||
Sbjct: 402 tcatctttgaagttcactaatttctcagctttcatattgctggtgatggtaaccaatatc 461
Query: 415 tgtggtggcattggggtgctttcaaatcttgccggtaccatcttgattgaaagagaatgg 474
|| || |||||||| || ||||||| |||||| || ||||||||||||||||||||||||
Sbjct: 462 tgcggcggcattggagtactttcaactcttgctggcaccatcttgattgaaagagaatgg 521
Query: 475 ttgttagttatatccgaaggtcaacccccggaattgctgacaaagatgaattcagttacc 534
|||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 522 ttgttagttatatccgaaggtcaacccccggaattgctgacaaagatgaactcggttacc 581
Query: 535 agacgcattgatctgagctgcaaacttcttgctcctgttataactgggtttataataagc 594
|||||||||||||| ||||||| ||||||||||||||||||||||| || |||||||||
Sbjct: 582 agacgcattgatctatgctgcaagcttcttgctcctgttataactggcttcataataagc 641
Query: 595 tttgtatccctagaagcatctgctataactctagcactctggaatactgtctctgtttgg 654
||||||||||| ||||||||||||||||| |||||||||||||||| || |||||||||
Sbjct: 642 tttgtatcccttaaagcatctgctataactttagcactctggaatacagtttctgtttgg 701
Query: 655 gtagagtattggctttttatctcggtgtataaggggattccagctttgggccaaagtagc 714
||||||||||||||||||| || |||||||| ||||||| |||||||||||||||||||
Sbjct: 702 gtagagtattggctttttacttctgtgtataatgggattctagctttgggccaaagtagc 761
Query: 715 ctgaggaggatgacaag 731
| |||||||||||||||
Sbjct: 762 cagaggaggatgacaag 778
>gnl|LJGI|GO023393 similar to UniRef100_A7QFH5 Cluster: Chromosome chr8 scaffold_88,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_88, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (26%)
Length = 499
Score = 321 bits (162), Expect = 7e-87
Identities = 312/362 (86%)
Strand = Plus / Plus
Query: 764 caacttcagagggagatagcttgctttctgttactgatagtaacactgaattggcagata 823
|||||||||| || || |||||| |||||| ||||| | ||||| | |||||| |||| |
Sbjct: 2 caacttcagaaggggacagcttggtttctggtactggtggtaactcagaattgacagaaa 61
Query: 824 gagaaagctggaacaaaatttctgagtggatttcaaggatcccttatattgatgcatgga 883
|||||| |||| | || | ||||||||||| | || ||||||| ||||||||||||
Sbjct: 62 gagaaacaaggaaaacaaaatttgagtggattttagagaacccttatgttgatgcatgga 121
Query: 884 gagtttatttacagcaacaagttgtgctacctggactagctctggctttgctatatttca 943
|||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||
Sbjct: 122 aagtttatttacagcaacaagttgttctacctggactagctctggctttgctatttttca 181
Query: 944 ctgtactcagctttggaactctaatgacagccacattagaatggaaaggcatatctgcat 1003
|||||||||||||||||||| | |||||||| || ||||||||| |||||||| ||||||
Sbjct: 182 ctgtactcagctttggaactttgatgacagcaaccttagaatgggaaggcatacctgcat 241
Query: 1004 atgttattggaatggcacgaggaataagtgctgtagttggaatcgctgcaacagttctat 1063
|||||||||| || || ||||||||||| ||||| ||||||| |||||||||||| |||
Sbjct: 242 atgttattggtatagcgcgaggaataagcgctgtgattggaatagctgcaacagttgtat 301
Query: 1064 atcctttgctgcagtctcgcataccgacaattagaactggactttggtcgatcgggtctc 1123
||||| ||||||| |||| |||| | || |||||||||||||||||||| || ||||||
Sbjct: 302 atcctgtgctgcaatctcacatatcaactattagaactggactttggtctatatggtctc 361
Query: 1124 ag 1125
||
Sbjct: 362 ag 363
>gnl|LJGI|TC80494 similar to UniRef100_A7QFH5 Cluster: Chromosome chr8 scaffold_88,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_88, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (23%)
Length = 688
Score = 303 bits (153), Expect = 2e-81
Identities = 207/225 (92%)
Strand = Plus / Plus
Query: 1123 cagaaccttgtgccagaatctgatcgtttgattgttggaggtgttcagaattctctgcag 1182
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 164 cagaaccttgtttcagaatctgatcgtttgattgttggaggtgttcagaattctctgcag 223
Query: 1183 tccttgatggatttattggcctatgttatgggaatcataatatctgatccacgggacttt 1242
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 tcattgatggatttattggcctatgttatgggaatcataatatctgatccacgggacttt 283
Query: 1243 tggaagttgattctgttatcgtttctggcagtcacattagctgcattcctttactgcatt 1302
|||||||||||| | ||||| ||||||||||| ||||||||||||||||| || |||||
Sbjct: 284 tggaagttgatttttttatcatttctggcagttacattagctgcattcctctattgcatc 343
Query: 1303 catgtataccgcgcggggaggcttatctttcactttgacagactt 1347
|||||||||| | | || || |||||||||||||||||||||
Sbjct: 344 catgtataccacatgcagaagcacatctttcactttgacagactt 388