Miyakogusa Predicted Gene

Lj3g3v1379440.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v1379440.1 tr|B4M2Y6|B4M2Y6_DROVI Ubiquitin
carboxyl-terminal hydrolase OS=Drosophila virilis GN=GJ19106 PE=3
S,33.87,8.8,seg,NULL,CUFF.42510.1
         (249 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC58749 similar to UniRef100_A7P3T7 Cluster: Chromosome...    58   3e-08

>gnl|LJGI|TC58749 similar to UniRef100_A7P3T7 Cluster: Chromosome chr1 scaffold_5,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr1 scaffold_5, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (33%)
          Length = 783

 Score = 58.0 bits (29), Expect = 3e-08
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                    
Query: 140 gggttcatgaagaaagtcaacaaccctttttcctcttcatc 180
           |||||||||||||||||||||||||| ||  ||||||||||
Sbjct: 118 gggttcatgaagaaagtcaacaaccccttcacctcttcatc 158