Miyakogusa Predicted Gene
- Lj3g3v1378290.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v1378290.1 Non Chatacterized Hit- tr|I1L239|I1L239_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,29.93,0.00000000002,APO,APO domain; APO_RNA-bind,APO domain; APO4
(ACCUMULATION OF PHOTOSYSTEM ONE 4),NULL; EUKARYOTIC
T,NODE_65675_length_1665_cov_11.205405.path2.1
(1005 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS334964 weakly similar to UniRef100_A7PXH9 Cluster: Ch... 769 0.0
gnl|LJGI|TC69068 similar to UniRef100_A7PXH9 Cluster: Chromosome... 541 e-153
gnl|LJGI|FS354217 similar to UniRef100_A7PXH9 Cluster: Chromosom... 278 6e-74
gnl|LJGI|TC69705 88 1e-16
>gnl|LJGI|FS334964 weakly similar to UniRef100_A7PXH9 Cluster: Chromosome chr12
scaffold_36, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr12 scaffold_36, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (32%)
Length = 690
Score = 769 bits (388), Expect = 0.0
Identities = 388/388 (100%)
Strand = Plus / Plus
Query: 1 atggcattgagtaagattccgcggcacaatgttgctttgttcgttgaatcaggtggctgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 atggcattgagtaagattccgcggcacaatgttgctttgttcgttgaatcaggtggctgc 362
Query: 61 cctcgccggtgttacgccaccagcaaagtagacctgaggaagttccaccccttgattctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 cctcgccggtgttacgccaccagcaaagtagacctgaggaagttccaccccttgattctg 422
Query: 121 gagaaaatcgagaagcgttctcaggcctaccctgttggcaccatggttcctgttgccaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 gagaaaatcgagaagcgttctcaggcctaccctgttggcaccatggttcctgttgccaag 482
Query: 181 gaggtcctcctctctaggaatgttctcatccatggcgtttccaccctcatcaactacttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 gaggtcctcctctctaggaatgttctcatccatggcgtttccaccctcatcaactacttc 542
Query: 241 cctttcatggcttgcaaattctgtccagagatatatattggcgagcaggggcatttaatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 cctttcatggcttgcaaattctgtccagagatatatattggcgagcaggggcatttaatt 602
Query: 301 cagacttgctggggttacaggcatcgtgccacgaaccgggttcatgaatgggtcaaaggt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 cagacttgctggggttacaggcatcgtgccacgaaccgggttcatgaatgggtcaaaggt 662
Query: 361 tgtttgaatgatatagttgttcctgttg 388
||||||||||||||||||||||||||||
Sbjct: 663 tgtttgaatgatatagttgttcctgttg 690
>gnl|LJGI|TC69068 similar to UniRef100_A7PXH9 Cluster: Chromosome chr12 scaffold_36,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_36, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (25%)
Length = 686
Score = 541 bits (273), Expect = e-153
Identities = 273/273 (100%)
Strand = Plus / Plus
Query: 733 ggagtgtttaagtgtgagagttggaaaggagctcacttttggataaaagctaatgtggat 792
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggagtgtttaagtgtgagagttggaaaggagctcacttttggataaaagctaatgtggat 60
Query: 793 catttagttcccccaaagatcgtatggagacgaagacctcaagatcctcctgtacttttg 852
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 catttagttcccccaaagatcgtatggagacgaagacctcaagatcctcctgtacttttg 120
Query: 853 aatgaagggagagacttctatgggcgtgttccagctatattggatctgtgcgcaaaagct 912
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aatgaagggagagacttctatgggcgtgttccagctatattggatctgtgcgcaaaagct 180
Query: 913 ggtgctattgtgcctgcagagtataataaaatgatgaaagagcaaggtttgcctggtcct 972
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggtgctattgtgcctgcagagtataataaaatgatgaaagagcaaggtttgcctggtcct 240
Query: 973 gccaataataaaatttggcaagggcattagagc 1005
|||||||||||||||||||||||||||||||||
Sbjct: 241 gccaataataaaatttggcaagggcattagagc 273
>gnl|LJGI|FS354217 similar to UniRef100_A7PXH9 Cluster: Chromosome chr12 scaffold_36,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_36, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (22%)
Length = 626
Score = 278 bits (140), Expect = 6e-74
Identities = 206/228 (90%)
Strand = Plus / Minus
Query: 756 gaaaggagctcacttttggataaaagctaatgtggatcatttagttcccccaaagatcgt 815
||||||| |||||||||||| |||||||||||||||| ||||||| || |||||||| ||
Sbjct: 626 gaaaggaactcacttttggacaaaagctaatgtggataatttagtgccaccaaagattgt 567
Query: 816 atggagacgaagacctcaagatcctcctgtacttttgaatgaagggagagacttctatgg 875
||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||||||
Sbjct: 566 atggaaacgaagacctcaagatcctcctgtacttttgaatgcagggagaaacttctatgg 507
Query: 876 gcgtgttccagctatattggatctgtgcgcaaaagctggtgctattgtgcctgcagagta 935
|||| |||||||| |||||||||||||| ||| ||||||||||||||||||||| ||||
Sbjct: 506 gcgtcttccagctgtattggatctgtgcacaatagctggtgctattgtgcctgctaagta 447
Query: 936 taataaaatgatgaaagagcaaggtttgcctggtcctgccaataataa 983
||||| |||||||||| ||||||| || |||| ||||| ||||||||
Sbjct: 446 taatattatgatgaaagtgcaaggtatgtctggccctgctaataataa 399
>gnl|LJGI|TC69705
Length = 1520
Score = 87.7 bits (44), Expect = 1e-16
Identities = 72/80 (90%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 824 gaagacctcaagatcctcctgtacttttgaatgaagggagagacttctatgggcgtgttc 883
|||||||||| ||||||||||||||| ||||||| ||||||||||| ||| |||||||||
Sbjct: 1090 gaagacctcatgatcctcctgtacttgtgaatgatgggagagacttatat-ggcgtgttc 1148
Query: 884 cagctatattggatctgtgc 903
|| ||||| ||| |||||||
Sbjct: 1149 caactatactgggtctgtgc 1168