Miyakogusa Predicted Gene
- Lj3g3v1353740.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v1353740.1 Non Chatacterized Hit- tr|B8BAL6|B8BAL6_ORYSI
Putative uncharacterized protein OS=Oryza sativa
subsp,68.97,2e-16,seg,NULL; FRINGE-RELATED,NULL; DUF604,Protein of
unknown function DUF604,CUFF.42509.1
(1410 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS340410 similar to UniRef100_A7PXJ9 Cluster: Chromosom... 1271 0.0
gnl|LJGI|TC67760 weakly similar to UniRef100_UPI0000162C67 Clust... 224 1e-57
gnl|LJGI|FS349733 weakly similar to UniRef100_A7PXJ9 Cluster: Ch... 100 5e-20
gnl|LJGI|TC68110 weakly similar to UniRef100_A7PXJ9 Cluster: Chr... 80 4e-14
gnl|LJGI|BP069537 similar to UniRef100_A7PXJ9 Cluster: Chromosom... 60 4e-08
gnl|LJGI|FS328127 similar to UniRef100_A7PXJ8 Cluster: Chromosom... 52 1e-05
gnl|LJGI|DC594683 similar to UniRef100_A7PXJ8 Cluster: Chromosom... 52 1e-05
>gnl|LJGI|FS340410 similar to UniRef100_A7PXJ9 Cluster: Chromosome chr12 scaffold_36,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_36, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (30%)
Length = 854
Score = 1271 bits (641), Expect = 0.0
Identities = 648/649 (99%), Gaps = 1/649 (0%)
Strand = Plus / Plus
Query: 1 atgatgaaatcacttcacaatactcctatcaaaaccccacctctcaccaaattcatttta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 atgatgaaatcacttcacaatactcctatcaaaaccccacctctcaccaaattcatttta 266
Query: 61 gtctcctcttcattttgtgccatttctctctttctatttacagtgctactctttacaaca 120
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 267 gtctcctcttcattttgtgccatt-ctctctttctatttacagtgctactctttacaaca 325
Query: 121 tcaaagatagatgtcttttcttcttcagaacctcaagtctctgatcctgatcctaccagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 tcaaagatagatgtcttttcttcttcagaacctcaagtctctgatcctgatcctaccagc 385
Query: 181 attgaccatcttgtctttggaattgcttcaaccggaacctcatggcctaagaggaatgaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 attgaccatcttgtctttggaattgcttcaaccggaacctcatggcctaagaggaatgaa 445
Query: 241 tatgccaagctctggtggattaaaacaatgaaaggttgtgtttttgtggataatctccca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 tatgccaagctctggtggattaaaacaatgaaaggttgtgtttttgtggataatctccca 505
Query: 301 cctgaagacaacactggtggaatttctcttcctcctctgtgtgtctctgaagacacttcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 cctgaagacaacactggtggaatttctcttcctcctctgtgtgtctctgaagacacttcc 565
Query: 361 cagtttcctttcacttacaagcccgggggactaagatcagcgatccgcgtggcgcgtgtg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 cagtttcctttcacttacaagcccgggggactaagatcagcgatccgcgtggcgcgtgtg 625
Query: 421 gtgaaggagacagtggcgctgaattattccggtgttcgatggtacgtgtttggagatgat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 gtgaaggagacagtggcgctgaattattccggtgttcgatggtacgtgtttggagatgat 685
Query: 481 gacactgttttcttccctgagaatctggtcaaaacactttccaaatatgatcacaggtta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 gacactgttttcttccctgagaatctggtcaaaacactttccaaatatgatcacaggtta 745
Query: 541 tggtactatgttggtgcttactctgagagttatgaggggacacagacttttggttttgga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 tggtactatgttggtgcttactctgagagttatgaggggacacagacttttggttttgga 805
Query: 601 atggcttttggtggtggtggttttgccattagttcctctctagcaaaag 649
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 806 atggcttttggtggtggtggttttgccattagttcctctctagcaaaag 854
>gnl|LJGI|TC67760 weakly similar to UniRef100_UPI0000162C67 Cluster: fringe-related
protein; n=1; Arabidopsis thaliana|Rep: fringe-related
protein - Arabidopsis thaliana, partial (38%)
Length = 1305
Score = 224 bits (113), Expect = 1e-57
Identities = 266/317 (83%)
Strand = Plus / Plus
Query: 460 tggtacgtgtttggagatgatgacactgttttcttccctgagaatctggtcaaaacactt 519
||||| ||||||||||||||||||||||||||||| || |||||| |||| || || |||
Sbjct: 771 tggtatgtgtttggagatgatgacactgttttctttccagagaatttggtgaagactctt 830
Query: 520 tccaaatatgatcacaggttatggtactatgttggtgcttactctgagagttatgagggg 579
|||||||||||||| | | |||||||||||||| || |||||||| ||||||| |
Sbjct: 831 tccaaatatgatcatggcctttggtactatgttggggcaaactctgaggtttatgagcag 890
Query: 580 acacagacttttggttttggaatggcttttggtggtggtggttttgccattagttcctct 639
| | | ||||| ||||||||||||||||| |||| ||||||||| || |||||||||
Sbjct: 891 aaccggttgtttgggtttggaatggcttttgggggtgctggttttgctatcagttcctct 950
Query: 640 ctagcaaaagttctagccaaggtgtttgattcatgtatacagaggtactcacatctttat 699
|| ||||| || | | |||||| |||||||| ||| | | |||||| | ||||| |||
Sbjct: 951 ctggcaaatgtcttggtcaaggtttttgattcgtgtttggaaaggtaccctcatctctat 1010
Query: 700 ggaagtgatgcaagggtgtactcttgcatagcagagctaggtgtgggattaacatatgaa 759
|||||||||| ||||||||||||||| |||||||||| ||||||||||||||| |||||
Sbjct: 1011 ggaagtgatggcagggtgtactcttgcttagcagagcttggtgtgggattaacacatgaa 1070
Query: 760 ccaggttttcatcaggt 776
|| ||||||||||||||
Sbjct: 1071 cctggttttcatcaggt 1087
>gnl|LJGI|FS349733 weakly similar to UniRef100_A7PXJ9 Cluster: Chromosome chr12
scaffold_36, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr12 scaffold_36, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (26%)
Length = 700
Score = 99.6 bits (50), Expect = 5e-20
Identities = 125/150 (83%)
Strand = Plus / Minus
Query: 1259 tcaaagtggtcactaataagttgaaccttgacagcaaacagttgcaggctccaagaaggc 1318
||||||||||||| || ||| | ||||||| | |||||||||| |||||||||||||||
Sbjct: 420 tcaaagtggtcaccaagaagctagaccttgatatcaaacagttgaaggctccaagaaggc 361
Query: 1319 aatgttgtgatgtgttgtcctctagctctggtcacctaatggaaattgcaattagagagt 1378
| || |||||||| || |||||||| || || ||| | ||||||| | ||| ||||| |
Sbjct: 360 actgctgtgatgtaatgccctctagcgctcgtgaccaactggaaatcgaaatcagagaat 301
Query: 1379 gcaaatatgatgaactgatttacatgcact 1408
||||| |||| ||| |||||||||||||||
Sbjct: 300 gcaaagatgaagaattgatttacatgcact 271
Score = 58.0 bits (29), Expect = 2e-07
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 1128 ccctgacccatgtagaagaccctccattttctatcttgacaaggtttcttctgggaaaga 1187
|||||||||||||| |||||||| |||||||||| ||||| || |||| ||| || ||
Sbjct: 563 ccctgacccatgtaagagaccctcagttttctatctagacaatgtgtcttttggtaatga 504
Query: 1188 tggcatcat 1196
|||||||||
Sbjct: 503 tggcatcat 495
>gnl|LJGI|TC68110 weakly similar to UniRef100_A7PXJ9 Cluster: Chromosome chr12
scaffold_36, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr12 scaffold_36, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (21%)
Length = 718
Score = 79.8 bits (40), Expect = 4e-14
Identities = 94/112 (83%)
Strand = Plus / Plus
Query: 1297 cagttgcaggctccaagaaggcaatgttgtgatgtgttgtcctctagctctggtcaccta 1356
|||||| |||||||||||||||| || |||||||| || |||||||| || || ||| |
Sbjct: 440 cagttgaaggctccaagaaggcactgctgtgatgtaatgccctctagcgctcgtgaccaa 499
Query: 1357 atggaaattgcaattagagagtgcaaatatgatgaactgatttacatgcact 1408
||||||| | ||| ||||| |||||| |||| ||| |||||||||||||||
Sbjct: 500 ctggaaatcgaaatcagagaatgcaaagatgaagaattgatttacatgcact 551
Score = 58.0 bits (29), Expect = 2e-07
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 1128 ccctgacccatgtagaagaccctccattttctatcttgacaaggtttcttctgggaaaga 1187
|||||||||||||| |||||||| |||||||||| ||||| || |||| ||| || ||
Sbjct: 84 ccctgacccatgtaagagaccctcagttttctatctagacaatgtgtcttttggtaatga 143
Query: 1188 tggcatcat 1196
|||||||||
Sbjct: 144 tggcatcat 152
>gnl|LJGI|BP069537 similar to UniRef100_A7PXJ9 Cluster: Chromosome chr12 scaffold_36,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_36, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (7%)
Length = 496
Score = 60.0 bits (30), Expect = 4e-08
Identities = 78/94 (82%)
Strand = Plus / Plus
Query: 778 gatttgaggggaaacatatttggcctattggcagcacatccattgagtcccttgttgtcc 837
|||||||||||| | | ||||||||||| || || |||||| | | ||||||||| |||
Sbjct: 403 gatttgaggggagatacctttggcctattagctgctcatccagtaactcccttgttatcc 462
Query: 838 ctgcatcacccagatcaaactgaacctatctttc 871
||||||||||| ||| | ||||| || |||||||
Sbjct: 463 ctgcatcaccctgattacactgatccaatctttc 496
>gnl|LJGI|FS328127 similar to UniRef100_A7PXJ8 Cluster: Chromosome chr12 scaffold_36,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_36, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (19%)
Length = 610
Score = 52.0 bits (26), Expect = 1e-05
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 400 gcgatccgcgtggcgcgtgtggtgaaggag 429
|||||||||||||||||||| |||||||||
Sbjct: 445 gcgatccgcgtggcgcgtgtagtgaaggag 474
>gnl|LJGI|DC594683 similar to UniRef100_A7PXJ8 Cluster: Chromosome chr12 scaffold_36,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_36, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (19%)
Length = 511
Score = 52.0 bits (26), Expect = 1e-05
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 400 gcgatccgcgtggcgcgtgtggtgaaggag 429
|||||||||||||||||||| |||||||||
Sbjct: 356 gcgatccgcgtggcgcgtgtagtgaaggag 385