Miyakogusa Predicted Gene

Lj3g3v1353730.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v1353730.1 tr|G7IKM1|G7IKM1_MEDTR Cysteine-rich repeat
secretory protein OS=Medicago truncatula
GN=MTR_2g088980,33.7,3e-18,Stress-antifung,Gnk2-homologous domain;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
GNK2,Gnk2-h,gene.g47266.t1.1
         (582 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC72978 similar to UniRef100_A7PXK4 Cluster: Chromosome...   119   2e-26

>gnl|LJGI|TC72978 similar to UniRef100_A7PXK4 Cluster: Chromosome chr12 scaffold_36,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr12 scaffold_36, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (77%)
          Length = 847

 Score =  119 bits (60), Expect = 2e-26
 Identities = 135/160 (84%)
 Strand = Plus / Plus

                                                                       
Query: 413 tttatgggttaactcagtgcaccagagacctttctagcgttgattgcaagaagtgtcttg 472
           |||||||||| |||||||| || |||||  | ||||| | |||||| |||||||||||||
Sbjct: 612 tttatgggttgactcagtgtactagagatttgtctagtggtgattgtaagaagtgtcttg 671

                                                                       
Query: 473 ataatgcaattggtgaacttccaaattgttgtgatgggaaaaaaggaggcagggttgttg 532
           || |||| |||   || ||||| |||||||||||||||||| |||| || || ||||| |
Sbjct: 672 atgatgccattaacgagcttccgaattgttgtgatgggaaagaaggtgggagagttgtgg 731

                                                   
Query: 533 gtggaagctgcaacattagatatgaaatttactcatttgt 572
           |||||||||||||| |||||||||| || ||| |||||||
Sbjct: 732 gtggaagctgcaactttagatatgagatatacccatttgt 771



 Score = 77.8 bits (39), Expect = 7e-14
 Identities = 87/103 (84%)
 Strand = Plus / Plus

                                                                       
Query: 113 cctcagaatgcaaaacctgtgtctctgaggcaaccacagaaatcctcagcctatgtcctc 172
           |||| |||||||||||||| ||||| ||| |  |||||||||||| || ||  |||||| 
Sbjct: 315 cctccgaatgcaaaacctgcgtctcagagtccgccacagaaatccgcaaccgctgtcctt 374

                                                      
Query: 173 acaacaaaggtgctattatatggtatgacaattgcatgttcaa 215
           ||||||||||||| || |||||||| || |||||| |||||||
Sbjct: 375 acaacaaaggtgcaatcatatggtacgataattgcttgttcaa 417