Miyakogusa Predicted Gene
- Lj3g3v1342680.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v1342680.1 Non Chatacterized Hit- tr|B8BAL6|B8BAL6_ORYSI
Putative uncharacterized protein OS=Oryza sativa
subsp,68.97,2e-16,DUF604,Protein of unknown function DUF604; seg,NULL;
FRINGE-RELATED,NULL,gene.g47264.t1.1
(1407 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS340410 similar to UniRef100_A7PXJ9 Cluster: Chromosom... 1265 0.0
gnl|LJGI|TC67760 weakly similar to UniRef100_UPI0000162C67 Clust... 224 1e-57
gnl|LJGI|FS349733 weakly similar to UniRef100_A7PXJ9 Cluster: Ch... 100 5e-20
gnl|LJGI|TC68110 weakly similar to UniRef100_A7PXJ9 Cluster: Chr... 80 4e-14
gnl|LJGI|BP069537 similar to UniRef100_A7PXJ9 Cluster: Chromosom... 60 4e-08
gnl|LJGI|FS328127 similar to UniRef100_A7PXJ8 Cluster: Chromosom... 52 1e-05
gnl|LJGI|DC594683 similar to UniRef100_A7PXJ8 Cluster: Chromosom... 52 1e-05
>gnl|LJGI|FS340410 similar to UniRef100_A7PXJ9 Cluster: Chromosome chr12 scaffold_36,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_36, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (30%)
Length = 854
Score = 1265 bits (638), Expect = 0.0
Identities = 645/646 (99%), Gaps = 1/646 (0%)
Strand = Plus / Plus
Query: 1 atgaaatcacttcacaatactcctatcaaaaccccacctctcaccaaattcattttagtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 atgaaatcacttcacaatactcctatcaaaaccccacctctcaccaaattcattttagtc 269
Query: 61 tcctcttcattttgtgccatttctctctttctatttacagtgctactctttacaacatca 120
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 270 tcctcttcattttgtgccatt-ctctctttctatttacagtgctactctttacaacatca 328
Query: 121 aagatagatgtcttttcttcttcagaacctcaagtctctgatcctgatcctaccagcatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 aagatagatgtcttttcttcttcagaacctcaagtctctgatcctgatcctaccagcatt 388
Query: 181 gaccatcttgtctttggaattgcttcaaccggaacctcatggcctaagaggaatgaatat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 gaccatcttgtctttggaattgcttcaaccggaacctcatggcctaagaggaatgaatat 448
Query: 241 gccaagctctggtggattaaaacaatgaaaggttgtgtttttgtggataatctcccacct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 gccaagctctggtggattaaaacaatgaaaggttgtgtttttgtggataatctcccacct 508
Query: 301 gaagacaacactggtggaatttctcttcctcctctgtgtgtctctgaagacacttcccag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 gaagacaacactggtggaatttctcttcctcctctgtgtgtctctgaagacacttcccag 568
Query: 361 tttcctttcacttacaagcccgggggactaagatcagcgatccgcgtggcgcgtgtggtg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 tttcctttcacttacaagcccgggggactaagatcagcgatccgcgtggcgcgtgtggtg 628
Query: 421 aaggagacagtggcgctgaattattccggtgttcgatggtacgtgtttggagatgatgac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 aaggagacagtggcgctgaattattccggtgttcgatggtacgtgtttggagatgatgac 688
Query: 481 actgttttcttccctgagaatctggtcaaaacactttccaaatatgatcacaggttatgg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 actgttttcttccctgagaatctggtcaaaacactttccaaatatgatcacaggttatgg 748
Query: 541 tactatgttggtgcttactctgagagttatgaggggacacagacttttggttttggaatg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 tactatgttggtgcttactctgagagttatgaggggacacagacttttggttttggaatg 808
Query: 601 gcttttggtggtggtggttttgccattagttcctctctagcaaaag 646
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 809 gcttttggtggtggtggttttgccattagttcctctctagcaaaag 854
>gnl|LJGI|TC67760 weakly similar to UniRef100_UPI0000162C67 Cluster: fringe-related
protein; n=1; Arabidopsis thaliana|Rep: fringe-related
protein - Arabidopsis thaliana, partial (38%)
Length = 1305
Score = 224 bits (113), Expect = 1e-57
Identities = 266/317 (83%)
Strand = Plus / Plus
Query: 457 tggtacgtgtttggagatgatgacactgttttcttccctgagaatctggtcaaaacactt 516
||||| ||||||||||||||||||||||||||||| || |||||| |||| || || |||
Sbjct: 771 tggtatgtgtttggagatgatgacactgttttctttccagagaatttggtgaagactctt 830
Query: 517 tccaaatatgatcacaggttatggtactatgttggtgcttactctgagagttatgagggg 576
|||||||||||||| | | |||||||||||||| || |||||||| ||||||| |
Sbjct: 831 tccaaatatgatcatggcctttggtactatgttggggcaaactctgaggtttatgagcag 890
Query: 577 acacagacttttggttttggaatggcttttggtggtggtggttttgccattagttcctct 636
| | | ||||| ||||||||||||||||| |||| ||||||||| || |||||||||
Sbjct: 891 aaccggttgtttgggtttggaatggcttttgggggtgctggttttgctatcagttcctct 950
Query: 637 ctagcaaaagttctagccaaggtgtttgattcatgtatacagaggtactcacatctttat 696
|| ||||| || | | |||||| |||||||| ||| | | |||||| | ||||| |||
Sbjct: 951 ctggcaaatgtcttggtcaaggtttttgattcgtgtttggaaaggtaccctcatctctat 1010
Query: 697 ggaagtgatgcaagggtgtactcttgcatagcagagctaggtgtgggattaacatatgaa 756
|||||||||| ||||||||||||||| |||||||||| ||||||||||||||| |||||
Sbjct: 1011 ggaagtgatggcagggtgtactcttgcttagcagagcttggtgtgggattaacacatgaa 1070
Query: 757 ccaggttttcatcaggt 773
|| ||||||||||||||
Sbjct: 1071 cctggttttcatcaggt 1087
>gnl|LJGI|FS349733 weakly similar to UniRef100_A7PXJ9 Cluster: Chromosome chr12
scaffold_36, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr12 scaffold_36, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (26%)
Length = 700
Score = 99.6 bits (50), Expect = 5e-20
Identities = 125/150 (83%)
Strand = Plus / Minus
Query: 1256 tcaaagtggtcactaataagttgaaccttgacagcaaacagttgcaggctccaagaaggc 1315
||||||||||||| || ||| | ||||||| | |||||||||| |||||||||||||||
Sbjct: 420 tcaaagtggtcaccaagaagctagaccttgatatcaaacagttgaaggctccaagaaggc 361
Query: 1316 aatgttgtgatgtgttgtcctctagctctggtcacctaatggaaattgcaattagagagt 1375
| || |||||||| || |||||||| || || ||| | ||||||| | ||| ||||| |
Sbjct: 360 actgctgtgatgtaatgccctctagcgctcgtgaccaactggaaatcgaaatcagagaat 301
Query: 1376 gcaaatatgatgaactgatttacatgcact 1405
||||| |||| ||| |||||||||||||||
Sbjct: 300 gcaaagatgaagaattgatttacatgcact 271
Score = 58.0 bits (29), Expect = 2e-07
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 1125 ccctgacccatgtagaagaccctccattttctatcttgacaaggtttcttctgggaaaga 1184
|||||||||||||| |||||||| |||||||||| ||||| || |||| ||| || ||
Sbjct: 563 ccctgacccatgtaagagaccctcagttttctatctagacaatgtgtcttttggtaatga 504
Query: 1185 tggcatcat 1193
|||||||||
Sbjct: 503 tggcatcat 495
>gnl|LJGI|TC68110 weakly similar to UniRef100_A7PXJ9 Cluster: Chromosome chr12
scaffold_36, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr12 scaffold_36, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (21%)
Length = 718
Score = 79.8 bits (40), Expect = 4e-14
Identities = 94/112 (83%)
Strand = Plus / Plus
Query: 1294 cagttgcaggctccaagaaggcaatgttgtgatgtgttgtcctctagctctggtcaccta 1353
|||||| |||||||||||||||| || |||||||| || |||||||| || || ||| |
Sbjct: 440 cagttgaaggctccaagaaggcactgctgtgatgtaatgccctctagcgctcgtgaccaa 499
Query: 1354 atggaaattgcaattagagagtgcaaatatgatgaactgatttacatgcact 1405
||||||| | ||| ||||| |||||| |||| ||| |||||||||||||||
Sbjct: 500 ctggaaatcgaaatcagagaatgcaaagatgaagaattgatttacatgcact 551
Score = 58.0 bits (29), Expect = 2e-07
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 1125 ccctgacccatgtagaagaccctccattttctatcttgacaaggtttcttctgggaaaga 1184
|||||||||||||| |||||||| |||||||||| ||||| || |||| ||| || ||
Sbjct: 84 ccctgacccatgtaagagaccctcagttttctatctagacaatgtgtcttttggtaatga 143
Query: 1185 tggcatcat 1193
|||||||||
Sbjct: 144 tggcatcat 152
>gnl|LJGI|BP069537 similar to UniRef100_A7PXJ9 Cluster: Chromosome chr12 scaffold_36,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_36, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (7%)
Length = 496
Score = 60.0 bits (30), Expect = 4e-08
Identities = 78/94 (82%)
Strand = Plus / Plus
Query: 775 gatttgaggggaaacatatttggcctattggcagcacatccattgagtcccttgttgtcc 834
|||||||||||| | | ||||||||||| || || |||||| | | ||||||||| |||
Sbjct: 403 gatttgaggggagatacctttggcctattagctgctcatccagtaactcccttgttatcc 462
Query: 835 ctgcatcacccagatcaaactgaacctatctttc 868
||||||||||| ||| | ||||| || |||||||
Sbjct: 463 ctgcatcaccctgattacactgatccaatctttc 496
>gnl|LJGI|FS328127 similar to UniRef100_A7PXJ8 Cluster: Chromosome chr12 scaffold_36,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_36, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (19%)
Length = 610
Score = 52.0 bits (26), Expect = 1e-05
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 397 gcgatccgcgtggcgcgtgtggtgaaggag 426
|||||||||||||||||||| |||||||||
Sbjct: 445 gcgatccgcgtggcgcgtgtagtgaaggag 474
>gnl|LJGI|DC594683 similar to UniRef100_A7PXJ8 Cluster: Chromosome chr12 scaffold_36,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_36, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (19%)
Length = 511
Score = 52.0 bits (26), Expect = 1e-05
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 397 gcgatccgcgtggcgcgtgtggtgaaggag 426
|||||||||||||||||||| |||||||||
Sbjct: 356 gcgatccgcgtggcgcgtgtagtgaaggag 385