Miyakogusa Predicted Gene
- Lj3g3v1341620.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v1341620.1 Non Chatacterized Hit- tr|I3S2F0|I3S2F0_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99.09,0,HLH,
helix-loop-helix DNA-binding domain,Helix-loop-helix domain; helix
loop helix domain,Helix-loop,CUFF.42506.1
(696 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58249 similar to UniRef100_A7P102 Cluster: Chromosome... 1318 0.0
gnl|LJGI|TC79705 weakly similar to UniRef100_A7P102 Cluster: Chr... 1027 0.0
gnl|LJGI|TC65685 similar to UniRef100_A7P102 Cluster: Chromosome... 78 8e-14
gnl|LJGI|TC60959 similar to UniRef100_A7P102 Cluster: Chromosome... 78 8e-14
gnl|LJGI|TC67303 similar to UniRef100_A7P102 Cluster: Chromosome... 68 8e-11
gnl|LJGI|TC65205 similar to UniRef100_A7P102 Cluster: Chromosome... 68 8e-11
>gnl|LJGI|TC58249 similar to UniRef100_A7P102 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (60%)
Length = 863
Score = 1318 bits (665), Expect = 0.0
Identities = 665/665 (100%)
Strand = Plus / Plus
Query: 32 gtgattcctgttggctctatgattatggctttgatgatatctctgttgctgctgcagctg 91
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42 gtgattcctgttggctctatgattatggctttgatgatatctctgttgctgctgcagctg 101
Query: 92 atttcatggttgcagactctgctgatttcacctgggttccttccaatatgaacttggaaa 151
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102 atttcatggttgcagactctgctgatttcacctgggttccttccaatatgaacttggaaa 161
Query: 152 tggaatactcactggattcaactgtcttcgaaagtggcccttcaaagcggttaaggactg 211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 162 tggaatactcactggattcaactgtcttcgaaagtggcccttcaaagcggttaaggactg 221
Query: 212 aatcaagtgtgtctggctccaaggcatgtcgtgagaaactacgaagggataaactgaatg 271
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 aatcaagtgtgtctggctccaaggcatgtcgtgagaaactacgaagggataaactgaatg 281
Query: 272 agaggtttctggaattgagttctatcttggagcctggtaggcagcccaaaacagacaagg 331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 agaggtttctggaattgagttctatcttggagcctggtaggcagcccaaaacagacaagg 341
Query: 332 ctgctataataagtgacgcggttcgagtggtaacccaattaagaaatgaagctgagaagc 391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 ctgctataataagtgacgcggttcgagtggtaacccaattaagaaatgaagctgagaagc 401
Query: 392 tgaaggaaatgaataacgatttacaagaaaaaattaaagagttgaaggctgagaagaatg 451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 tgaaggaaatgaataacgatttacaagaaaaaattaaagagttgaaggctgagaagaatg 461
Query: 452 agattcgtgatgagaagaataagctgaagctagacaaagaaaagttagagaagaaggtca 511
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 agattcgtgatgagaagaataagctgaagctagacaaagaaaagttagagaagaaggtca 521
Query: 512 aattgagaaatgtacagcctggcttcctccctcacgccgacgcagctgttaaagggaaag 571
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 aattgagaaatgtacagcctggcttcctccctcacgccgacgcagctgttaaagggaaag 581
Query: 572 gtgctgctagccacaagctgataccttacattggttatcctggaattgccatgtggcagt 631
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 gtgctgctagccacaagctgataccttacattggttatcctggaattgccatgtggcagt 641
Query: 632 ttatgccctctgctgtacttgatacatcaagggatcatcttcttcgacctccagttgcct 691
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 ttatgccctctgctgtacttgatacatcaagggatcatcttcttcgacctccagttgcct 701
Query: 692 agagt 696
|||||
Sbjct: 702 agagt 706
>gnl|LJGI|TC79705 weakly similar to UniRef100_A7P102 Cluster: Chromosome chr19
scaffold_4, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr19 scaffold_4, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (45%)
Length = 648
Score = 1027 bits (518), Expect = 0.0
Identities = 527/530 (99%)
Strand = Plus / Plus
Query: 32 gtgattcctgttggctctatgattatggctttgatgatatctctgttgctgctgcagctg 91
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 gtgattcctgttggctctatgattatggctttgatgatatctctgttgctgctgcagctg 178
Query: 92 atttcatggttgcagactctgctgatttcacctgggttccttccaatatgaacttggaaa 151
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 atttcatggttgcagactctgctgatttcacctgggttccttccaatatgaacttggaaa 238
Query: 152 tggaatactcactggattcaactgtcttcgaaagtggcccttcaaagcggttaaggactg 211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 tggaatactcactggattcaactgtcttcgaaagtggcccttcaaagcggttaaggactg 298
Query: 212 aatcaagtgtgtctggctccaaggcatgtcgtgagaaactacgaagggataaactgaatg 271
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 aatcaagtgtgtctggctccaaggcatgtcgtgagaaactacgaagggataaactgaatg 358
Query: 272 agaggtttctggaattgagttctatcttggagcctggtaggcagcccaaaacagacaagg 331
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 359 agaggtttctggaattgagttctatctcggagcctggtaggcagcccaaaacagacaagg 418
Query: 332 ctgctataataagtgacgcggttcgagtggtaacccaattaagaaatgaagctgagaagc 391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 ctgctataataagtgacgcggttcgagtggtaacccaattaagaaatgaagctgagaagc 478
Query: 392 tgaaggaaatgaataacgatttacaagaaaaaattaaagagttgaaggctgagaagaatg 451
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 479 tgaaggaaatgaataacgatttacaagaaaaaattaaagagttgaaggctgaggagaatg 538
Query: 452 agattcgtgatgagaagaataagctgaagctagacaaagaaaagttagagaagaaggtca 511
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 agattcgtgatgagaagaataagctgaagctagacaaagaaaagttagagaagaaggtca 598
Query: 512 aattgagaaatgtacagcctggcttcctccctcacgccgacgcagctgtt 561
||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 599 aattgagaaatgtgcagcctggcttcctccctcacgccgacgcagctgtt 648
>gnl|LJGI|TC65685 similar to UniRef100_A7P102 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (68%)
Length = 769
Score = 77.8 bits (39), Expect = 8e-14
Identities = 72/83 (86%)
Strand = Plus / Plus
Query: 256 agggataaactgaatgagaggtttctggaattgagttctatcttggagcctggtaggcag 315
||||||||||||||||| | |||| | ||||| | || |||||||||||||| ||||
Sbjct: 405 agggataaactgaatgacaagtttgtcgaattaggctccatcttggagcctggaaggcct 464
Query: 316 cccaaaacagacaaggctgctat 338
|||||||||||||||||||||||
Sbjct: 465 cccaaaacagacaaggctgctat 487
Score = 73.8 bits (37), Expect = 1e-12
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 415 caagaaaaaattaaagagttgaaggctgagaagaatgagattcgtgatgagaa 467
|||||||| || |||||||| |||||||||||||||||| |||||||||||||
Sbjct: 564 caagaaaagataaaagagttaaaggctgagaagaatgagcttcgtgatgagaa 616
>gnl|LJGI|TC60959 similar to UniRef100_A7P102 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (77%)
Length = 764
Score = 77.8 bits (39), Expect = 8e-14
Identities = 72/83 (86%)
Strand = Plus / Plus
Query: 256 agggataaactgaatgagaggtttctggaattgagttctatcttggagcctggtaggcag 315
||||||||||||||||| | |||| | ||||| | || |||||||||||||| ||||
Sbjct: 309 agggataaactgaatgacaagtttgtcgaattaggctccatcttggagcctggaaggcct 368
Query: 316 cccaaaacagacaaggctgctat 338
|||||||||||||||||||||||
Sbjct: 369 cccaaaacagacaaggctgctat 391
Score = 65.9 bits (33), Expect = 3e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 415 caagaaaaaattaaagagttgaaggctgagaagaatgagattcgtgatgagaa 467
|||||||| || |||||||| |||||||||||||||||| ||| |||||||||
Sbjct: 468 caagaaaagataaaagagttaaaggctgagaagaatgagcttcttgatgagaa 520
>gnl|LJGI|TC67303 similar to UniRef100_A7P102 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (47%)
Length = 721
Score = 67.9 bits (34), Expect = 8e-11
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 415 caagaaaaaattaaagagttgaaggctgagaagaatgagattcgtgatgagaag 468
||||| || ||||||||||| ||| |||||||||||||| ||||||||||||||
Sbjct: 615 caagagaagattaaagagttaaagactgagaagaatgagcttcgtgatgagaag 668
>gnl|LJGI|TC65205 similar to UniRef100_A7P102 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (79%)
Length = 1065
Score = 67.9 bits (34), Expect = 8e-11
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 415 caagaaaaaattaaagagttgaaggctgagaagaatgagattcgtgatgagaag 468
||||| || ||||||||||| ||| |||||||||||||| ||||||||||||||
Sbjct: 552 caagagaagattaaagagttaaagactgagaagaatgagcttcgtgatgagaag 605