Miyakogusa Predicted Gene

Lj3g3v1341610.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v1341610.1 Non Chatacterized Hit- tr|D8SK39|D8SK39_SELML
Putative uncharacterized protein (Fragment)
OS=Selagin,31.03,0.00000000003,seg,NULL; Cupredoxins,Cupredoxin; no
description,Cupredoxin; Cu_bind_like,Plastocyanin-like;
PHYTOCY,CUFF.42505.1
         (444 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AV407087 weakly similar to UniRef100_A7PXK7 Cluster: Ch...   674   0.0  

>gnl|LJGI|AV407087 weakly similar to UniRef100_A7PXK7 Cluster: Chromosome chr12
           scaffold_36, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr12 scaffold_36, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (44%)
          Length = 363

 Score =  674 bits (340), Expect = 0.0
 Identities = 340/340 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgggtgtacttcaagtcattatcaggttatctttggttgctacactcatcaaattggcc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24  atgggtgtacttcaagtcattatcaggttatctttggttgctacactcatcaaattggcc 83

                                                                       
Query: 61  atggctacggatcacattgttggaggaccaaatggtgggtgggatgcaacctcaaacctt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84  atggctacggatcacattgttggaggaccaaatggtgggtgggatgcaacctcaaacctt 143

                                                                       
Query: 121 caatcatggggaacatcccaacaattttcagtgggagacaatctcattttccagtaccag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 caatcatggggaacatcccaacaattttcagtgggagacaatctcattttccagtaccag 203

                                                                       
Query: 181 ccaaaccataatgtgattgaagttacaaaagcagattatgactcctgccaggcaactagc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ccaaaccataatgtgattgaagttacaaaagcagattatgactcctgccaggcaactagc 263

                                                                       
Query: 241 ccaattcagtcttacagtgatggtgccacaaccatccctctcagctcaccaggaaaaaga 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ccaattcagtcttacagtgatggtgccacaaccatccctctcagctcaccaggaaaaaga 323

                                                   
Query: 301 tacttcatttgtggggcaataggacattgcacccaaggaa 340
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tacttcatttgtggggcaataggacattgcacccaaggaa 363