Miyakogusa Predicted Gene
- Lj3g3v1340420.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v1340420.1 tr|A8J251|A8J251_CHLRE Predicted protein
OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_191680 PE=4
SV=1,38.06,0.000000000002,seg,NULL,CUFF.42477.1
(855 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67209 similar to UniRef100_A7PXJ4 Cluster: Chromosome... 1695 0.0
gnl|LJGI|TC72781 similar to UniRef100_A7PXJ4 Cluster: Chromosome... 1134 0.0
gnl|LJGI|TC57482 similar to UniRef100_A7PXJ4 Cluster: Chromosome... 618 e-176
gnl|LJGI|TC69117 similar to UniRef100_A7PXJ4 Cluster: Chromosome... 369 e-101
gnl|LJGI|AV773604 188 4e-47
>gnl|LJGI|TC67209 similar to UniRef100_A7PXJ4 Cluster: Chromosome chr12 scaffold_36,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_36, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (88%)
Length = 1423
Score = 1695 bits (855), Expect = 0.0
Identities = 855/855 (100%)
Strand = Plus / Plus
Query: 1 atgtcaactggtggcgctggtgctggtgacggtgacacctccaaacaacaactctttcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 atgtcaactggtggcgctggtgctggtgacggtgacacctccaaacaacaactctttcac 186
Query: 61 ctcatcaaacgcttcggtgcttatgtcactttcaagatctccaacctcgtctccctctct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 ctcatcaaacgcttcggtgcttatgtcactttcaagatctccaacctcgtctccctctct 246
Query: 121 cttcacaatctcgatatacgctctattggggcggttgctggtctagctgttgcaattgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 cttcacaatctcgatatacgctctattggggcggttgctggtctagctgttgcaattgtt 306
Query: 181 ttcacatggaggctgttgagatcccctggtgagcctcaacagaggcaacaaaaacggcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 ttcacatggaggctgttgagatcccctggtgagcctcaacagaggcaacaaaaacggcaa 366
Query: 241 ggtgcttcatctagtaatagtaatcctggagcaagggcaggttcaattgcctcggtagtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 ggtgcttcatctagtaatagtaatcctggagcaagggcaggttcaattgcctcggtagtt 426
Query: 301 ccttctgaagctagtttgccctcacatgattcaagggcacaaaatgttgtggatgagttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 ccttctgaagctagtttgccctcacatgattcaagggcacaaaatgttgtggatgagttc 486
Query: 361 tttcagccagtcaagccaaccttggggcagatagttaggcagaagttgagtgaaggaaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 tttcagccagtcaagccaaccttggggcagatagttaggcagaagttgagtgaaggaaga 546
Query: 421 aaggtaacttgtcgtcttcttggagtggtccttgaggaaactagtccagaggagcttcag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 aaggtaacttgtcgtcttcttggagtggtccttgaggaaactagtccagaggagcttcag 606
Query: 481 aaacaagctactgtcagatcctctgtgctagaagtattgttggaaataacaaaatattgt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 aaacaagctactgtcagatcctctgtgctagaagtattgttggaaataacaaaatattgt 666
Query: 541 gatttatatctcatggaacgagttctggatgacgaaagcgagaaaagagttcttgtagcg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 gatttatatctcatggaacgagttctggatgacgaaagcgagaaaagagttcttgtagcg 726
Query: 601 ttagaagaagcaggggtattcacttcaggtggtttggttaaggacaaggttctcttctgc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 ttagaagaagcaggggtattcacttcaggtggtttggttaaggacaaggttctcttctgc 786
Query: 661 agcacagagaatggacggtcatcatttgttcgacaattggagccagattggcatatcgac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 787 agcacagagaatggacggtcatcatttgttcgacaattggagccagattggcatatcgac 846
Query: 721 acaaatcctgaaattgtctttcagttagccaggtttatcaagtatcaactccatgtatct 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 847 acaaatcctgaaattgtctttcagttagccaggtttatcaagtatcaactccatgtatct 906
Query: 781 cctcacaaaagcgaacgaactgctggtaatgtgttcagtgctccagccctggaactgttc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 907 cctcacaaaagcgaacgaactgctggtaatgtgttcagtgctccagccctggaactgttc 966
Query: 841 tttggatccatatga 855
|||||||||||||||
Sbjct: 967 tttggatccatatga 981
>gnl|LJGI|TC72781 similar to UniRef100_A7PXJ4 Cluster: Chromosome chr12 scaffold_36,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_36, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (55%)
Length = 730
Score = 1134 bits (572), Expect = 0.0
Identities = 572/572 (100%)
Strand = Plus / Plus
Query: 1 atgtcaactggtggcgctggtgctggtgacggtgacacctccaaacaacaactctttcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 atgtcaactggtggcgctggtgctggtgacggtgacacctccaaacaacaactctttcac 218
Query: 61 ctcatcaaacgcttcggtgcttatgtcactttcaagatctccaacctcgtctccctctct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 ctcatcaaacgcttcggtgcttatgtcactttcaagatctccaacctcgtctccctctct 278
Query: 121 cttcacaatctcgatatacgctctattggggcggttgctggtctagctgttgcaattgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 cttcacaatctcgatatacgctctattggggcggttgctggtctagctgttgcaattgtt 338
Query: 181 ttcacatggaggctgttgagatcccctggtgagcctcaacagaggcaacaaaaacggcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 ttcacatggaggctgttgagatcccctggtgagcctcaacagaggcaacaaaaacggcaa 398
Query: 241 ggtgcttcatctagtaatagtaatcctggagcaagggcaggttcaattgcctcggtagtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 ggtgcttcatctagtaatagtaatcctggagcaagggcaggttcaattgcctcggtagtt 458
Query: 301 ccttctgaagctagtttgccctcacatgattcaagggcacaaaatgttgtggatgagttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 ccttctgaagctagtttgccctcacatgattcaagggcacaaaatgttgtggatgagttc 518
Query: 361 tttcagccagtcaagccaaccttggggcagatagttaggcagaagttgagtgaaggaaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 tttcagccagtcaagccaaccttggggcagatagttaggcagaagttgagtgaaggaaga 578
Query: 421 aaggtaacttgtcgtcttcttggagtggtccttgaggaaactagtccagaggagcttcag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 aaggtaacttgtcgtcttcttggagtggtccttgaggaaactagtccagaggagcttcag 638
Query: 481 aaacaagctactgtcagatcctctgtgctagaagtattgttggaaataacaaaatattgt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 aaacaagctactgtcagatcctctgtgctagaagtattgttggaaataacaaaatattgt 698
Query: 541 gatttatatctcatggaacgagttctggatga 572
||||||||||||||||||||||||||||||||
Sbjct: 699 gatttatatctcatggaacgagttctggatga 730
>gnl|LJGI|TC57482 similar to UniRef100_A7PXJ4 Cluster: Chromosome chr12 scaffold_36,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_36, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (86%)
Length = 1246
Score = 618 bits (312), Expect = e-176
Identities = 614/715 (85%), Gaps = 6/715 (0%)
Strand = Plus / Plus
Query: 141 ctctattggggcggttgctggtctagctgttgcaattgttttcacatggaggctgttgag 200
|||||||||||| ||||| ||||| || |||| ||| ||||||| ||||||||||||||
Sbjct: 234 ctctattggggctgttgcgggtcttgccattgcgatttttttcacctggaggctgttgag 293
Query: 201 atcccctggtgagcctcaacagaggcaacaaaaacggcaaggtgcttcatctagtaatag 260
||| |||||||| ||||||| ||||||| |||||||||| || | |||||||||
Sbjct: 294 atcacctggtgaacctcaaccgaggcaaagaaaacggcaaacgactacttctagtaat-- 351
Query: 261 taatcctggagcaagggcaggttcaattgcctcggtagttccttctgaagctagtttgcc 320
||||||| || || ||||| |||||| ||||||||||| | || | ||| ||
Sbjct: 352 ----cctggagtcagtacacattcaaatgcctctgtagttccttccggagttcgttcccc 407
Query: 321 ctcacatgattcaagggcacaaaatgttgtggatgagttctttcagccagtcaagccaac 380
||| |||||||||||||| ||||| || |||||| | ||||||||||||||||||||
Sbjct: 408 ctcgggcgattcaagggcacagaatgtagttgatgagctgtttcagccagtcaagccaac 467
Query: 381 cttggggcagatagttaggcagaagttgagtgaaggaagaaaggtaacttgtcgtcttct 440
|||||| || || |||||||||||||| | ||||||||||||||||||||||||||||||
Sbjct: 468 cttgggccaaattgttaggcagaagttaaatgaaggaagaaaggtaacttgtcgtcttct 527
Query: 441 tggagtggtccttgaggaaactagtccagaggagcttcagaaacaagctactgtcagatc 500
||||||| ||||||||||||||||||||||||||||||||||||||| ||||| | |||
Sbjct: 528 tggagtgatccttgaggaaactagtccagaggagcttcagaaacaagtgactgtgaaatc 587
Query: 501 ctctgtgctagaagtattgttggaaataacaaaatattgtgatttatatctcatggaacg 560
| ||||||| |||||||| |||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 588 cactgtgcttgaagtattattggaaataacaaaattttgcgatttatatctcatggaacg 647
Query: 561 agttctggatgacgaaagcgagaaaagagttcttgtagcgttagaagaagcaggggtatt 620
|||||||||||| |||||||||||||||||||||||||| |||||||| || ||||||||
Sbjct: 648 agttctggatgatgaaagcgagaaaagagttcttgtagcattagaagatgctggggtatt 707
Query: 621 cacttcaggtggtttggttaaggacaaggttctcttctgcagcacagagaatggacggtc 680
||||| ||||||||||| ||||||||||| |||||||| |||||||||| ||| || ||
Sbjct: 708 tacttctggtggtttggtcaaggacaaggtcctcttctgtagcacagagattgggcgatc 767
Query: 681 atcatttgttcgacaattggagccagattggcatatcgacacaaatcctgaaattgtctt 740
||||||||||| |||||||| ||||| |||||||||||| |||||||||||||| |||
Sbjct: 768 ttcatttgttcggcaattggaaccagactggcatatcgactcaaatcctgaaattatctc 827
Query: 741 tcagttagccaggtttatcaagtatcaactccatgtatctcctcacaaaagcgaacgaac 800
||||||||| || |||||||| || ||||| ||||| |||||| | || ||||||||
Sbjct: 828 tcagttagctagatttatcaaataccaacttcatgtctctccttttagaacggaacgaac 887
Query: 801 tgctggtaatgtgttcagtgctccagccctggaactgttctttggatccatatga 855
||||| ||| || ||||||||||| ||||||||| |||||||||||||| ||||
Sbjct: 888 tgctgctaacgtattcagtgctccgtccctggaacagttctttggatccacatga 942
>gnl|LJGI|TC69117 similar to UniRef100_A7PXJ4 Cluster: Chromosome chr12 scaffold_36,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_36, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (44%)
Length = 784
Score = 369 bits (186), Expect = e-101
Identities = 315/358 (87%)
Strand = Plus / Plus
Query: 498 atcctctgtgctagaagtattgttggaaataacaaaatattgtgatttatatctcatgga 557
|||| ||||||| |||||||| |||||||||||||||| ||| |||||||||||||||||
Sbjct: 17 atccactgtgcttgaagtattattggaaataacaaaattttgcgatttatatctcatgga 76
Query: 558 acgagttctggatgacgaaagcgagaaaagagttcttgtagcgttagaagaagcaggggt 617
||||||||||||||| |||||||||||||||||||||||||| |||||||| || |||||
Sbjct: 77 acgagttctggatgatgaaagcgagaaaagagttcttgtagcattagaagatgctggggt 136
Query: 618 attcacttcaggtggtttggttaaggacaaggttctcttctgcagcacagagaatggacg 677
||| ||||| ||||||||||| ||||||||||| |||||||| |||||||||| ||| ||
Sbjct: 137 atttacttctggtggtttggtcaaggacaaggtcctcttctgtagcacagagattgggcg 196
Query: 678 gtcatcatttgttcgacaattggagccagattggcatatcgacacaaatcctgaaattgt 737
|| ||||||||||| |||||||| ||||| |||||||||||| |||||||||||||| |
Sbjct: 197 atcttcatttgttcggcaattggaaccagactggcatatcgactcaaatcctgaaattat 256
Query: 738 ctttcagttagccaggtttatcaagtatcaactccatgtatctcctcacaaaagcgaacg 797
|| ||||||||| || |||||||| || ||||| ||||| |||||| | || |||||
Sbjct: 257 ctctcagttagctagatttatcaaataccaacttcatgtctctccttttagaacggaacg 316
Query: 798 aactgctggtaatgtgttcagtgctccagccctggaactgttctttggatccatatga 855
|||||||| ||| || ||||||||||| ||||||||| |||||||||||||| ||||
Sbjct: 317 aactgctgctaacgtattcagtgctccgtccctggaacagttctttggatccacatga 374
>gnl|LJGI|AV773604
Length = 507
Score = 188 bits (95), Expect = 4e-47
Identities = 276/306 (90%), Gaps = 24/306 (7%)
Strand = Plus / Minus
Query: 574 gaaagcgagaaaagagttcttgtag-cgttagaagaag-caggggtattcacttca-ggt 630
|||||||||||||||||| ||||| |||||||||||| ||||||||||||||||| |||
Sbjct: 507 gaaagcgagaaaagagttactgtagtcgttagaagaagacaggggtattcacttcacggt 448
Query: 631 gg-tttggtta-agga-caaggttc-tctt-ctgcagcaca-gagaa-tggacgg-tcat 682
|| |||||||| |||| |||||||| |||| ||||||||| ||||| ||||||| ||||
Sbjct: 447 ggctttggttataggancaaggttcctctttctgcagcacccgagaactggacgggtcat 388
Query: 683 ca-tttgtt-cgaca-attggag-ccagattggc--atatcgacaca-aatcc-tgaaat 734
|| |||||| ||||| ||||||| ||||||| || ||||||||||| ||||| ||||||
Sbjct: 387 cactttgtttcgacacattggagtccagattcgcgcatatcgacacacaatccctgaaat 328
Query: 735 tgtctttcagttagcc-aggttt-atcaagtatcaactcca-tgtatctcctcacaaaag 791
|||||||||||||||| |||||| ||||||||||||||||| ||||||||||||| || |
Sbjct: 327 tgtctttcagttagcccaggtttcatcaagtatcaactccactgtatctcctcaccaacg 268
Query: 792 cgaacgaactgctggtaatgtgttcagtgctccag-ccctggaa-ctgttctttggatcc 849
||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 267 cgaacgaactgctggtaatgtgttcagtgctccagaccctggaacctgttctttggatcc 208
Query: 850 atatga 855
||||||
Sbjct: 207 atatga 202