Miyakogusa Predicted Gene
- Lj3g3v1339020.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v1339020.1 Non Chatacterized Hit- tr|D7MCD2|D7MCD2_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,31.12,2e-18,FAMILY NOT NAMED,NULL; Auxin_canalis,Domain of
unknown function DUF828; PH_2,Pleckstrin-like, plant;,gene.g47222.t1.1
(1281 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP046270 similar to UniRef100_A7PUE8 Cluster: Chromosom... 440 e-122
gnl|LJGI|AV407263 similar to UniRef100_A7NWT2 Cluster: Chromosom... 82 1e-14
gnl|LJGI|TC65396 similar to UniRef100_A7NWT2 Cluster: Chromosome... 74 2e-12
>gnl|LJGI|BP046270 similar to UniRef100_A7PUE8 Cluster: Chromosome chr7 scaffold_31,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_31, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (24%)
Length = 549
Score = 440 bits (222), Expect = e-122
Identities = 222/222 (100%)
Strand = Plus / Minus
Query: 1060 gatgttgtgttagatgtgagcacaaatttaccagcatggccaggaaggcatctttttgat 1119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 gatgttgtgttagatgtgagcacaaatttaccagcatggccaggaaggcatctttttgat 352
Query: 1120 gatggtgaaaaaagaaggtatttcggattgaagacagagtcatggggggttgtggagttt 1179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 gatggtgaaaaaagaaggtatttcggattgaagacagagtcatggggggttgtggagttt 292
Query: 1180 gaatgtagaaatcaaagagaatatgatatctggactcaaggtgtttcaagacttctttcc 1239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 gaatgtagaaatcaaagagaatatgatatctggactcaaggtgtttcaagacttctttcc 232
Query: 1240 attgttgcccagagacagaagcaaaacagaaaaaagatttga 1281
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 attgttgcccagagacagaagcaaaacagaaaaaagatttga 190
Score = 61.9 bits (31), Expect = 9e-09
Identities = 31/31 (100%)
Strand = Plus / Minus
Query: 1030 ggaagtgaattactcaaacggacccgtaaag 1060
|||||||||||||||||||||||||||||||
Sbjct: 549 ggaagtgaattactcaaacggacccgtaaag 519
>gnl|LJGI|AV407263 similar to UniRef100_A7NWT2 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (6%)
Length = 238
Score = 81.8 bits (41), Expect = 1e-14
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 1 atggagtttctgtcaaggtcatggagtgcctctgctcttgaggtctctaaagc 53
|||||||||||||||||||||||||||||||| ||||||||||| || |||||
Sbjct: 103 atggagtttctgtcaaggtcatggagtgcctcagctcttgaggtttccaaagc 155
>gnl|LJGI|TC65396 similar to UniRef100_A7NWT2 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (64%)
Length = 1421
Score = 73.8 bits (37), Expect = 2e-12
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 1163 ggggggttgtggagtttgaatgtagaaatcaaagagaatatgatatctggactcaaggtg 1222
|||| |||||||| ||||| || |||||||||||||| |||||| | |||||||||||||
Sbjct: 929 ggggtgttgtggaatttgagtgcagaaatcaaagagagtatgatgtgtggactcaaggtg 988
Query: 1223 tttcaagacttct 1235
| ||||| |||||
Sbjct: 989 tgtcaaggcttct 1001
Score = 56.0 bits (28), Expect = 6e-07
Identities = 73/88 (82%)
Strand = Plus / Plus
Query: 653 agatggctaatacagacatggctgtggcttctgcagctactttggttgctgctcagtgtg 712
||||||| || || |||||||| ||||| || || || || |||| |||||||||||||
Sbjct: 296 agatggccaagacggacatggcggtggcgtcggcggccacgctggtggctgctcagtgtg 355
Query: 713 tagaagctgctgaagcaatgggagctga 740
| || ||||| ||||| |||||||||||
Sbjct: 356 ttgaggctgcggaagctatgggagctga 383