Miyakogusa Predicted Gene
- Lj3g3v1338000.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v1338000.1 Non Chatacterized Hit- tr|I1LRR5|I1LRR5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.39507
PE,88.58,0,coiled-coil,NULL; Homeodomain,Homeodomain; in StAR and
phosphatidylcholine transfer pro,Lipid-bindin,CUFF.42457.1
(2223 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC77608 homologue to UniRef100_A7PXH2 Cluster: Chromoso... 1308 0.0
gnl|LJGI|AV428630 homologue to UniRef100_O23045 Cluster: YUP8H12... 670 0.0
gnl|LJGI|TC75175 homologue to UniRef100_A7PXH2 Cluster: Chromoso... 416 e-115
gnl|LJGI|TC79311 186 4e-46
gnl|LJGI|DC596654 similar to UniRef100_A7QUM2 Cluster: Chromosom... 182 6e-45
>gnl|LJGI|TC77608 homologue to UniRef100_A7PXH2 Cluster: Chromosome chr12 scaffold_36,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_36, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (31%)
Length = 698
Score = 1308 bits (660), Expect = 0.0
Identities = 688/692 (99%), Gaps = 4/692 (0%)
Strand = Plus / Plus
Query: 1227 tttgcgccctagtccttctgctagatgtagaagaaggccttctggttgcttaatccaaga 1286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tttgcgccctagtccttctgctagatgtagaagaaggccttctggttgcttaatccaaga 60
Query: 1287 aatgcccaatggctactcaaaggtcacctgggttgagcatgtagaagtggatgaaagagg 1346
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aatgcccaatggctactcaaaggtcacctgggttgagcatgtagaagtggatgaaagagg 120
Query: 1347 tgttcacaatctatacaagcagcttgttagctctggacatgcatttggtgcaaaacgttg 1406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgttcacaatctatacaagcagcttgttagctctggacatgcatttggtgcaaaacgttg 180
Query: 1407 gatttcaaccttagatcgacaatgtgaaaggcttgctagtgccatggcaactaacattcc 1466
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gatttcaaccttagatcgacaatgtgaaaggcttgctagtgccatggcaactaacattcc 240
Query: 1467 cacagttgatgttggcgtgataacaaaccaagatgggagaaagagcatgttgaaactggc 1526
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cacagttgatgttggcgtgataacaaaccaagatgggagaaagagcatgttgaaactggc 300
Query: 1527 tgagaggatggttataagcttttgtgctggagtcagtgcttccactgctcacacatggac 1586
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgagaggatggttataagcttttgtgctggagtcagtgcttccactgctcacacatggac 360
Query: 1587 aacaatctccgggactggagctgaaactgatgatgttcgggtcatgacccgaaagagtgt 1646
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aacaatctccgggactggagctgaaactgatgatgttcgggtcatgacccgaaagagtgt 420
Query: 1647 ggatgacccaggtaggcctccgggtatcgtccttagtgctgcaacttctttttggcttcc 1706
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ggatgacccaggtaggcctccgggtatcgtccttagtgctgcaacttctttttggcttcc 480
Query: 1707 agtgccacctaagagggtctttgaatttctccgcgatgagaactctagaagtgagtggga 1766
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 agtgccacctaagagggtctttgaatttctccgcgatgagaactctagaagtgagtggga 540
Query: 1767 tatcctttccaatggtggagtagttcaagaaatggcacacattgctaacggacgagatac 1826
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tatcctttccaatggtggagtagttcaagaaatggcacacattgctaacggacgagatac 600
Query: 1827 tggaaattgtgtctctctacttcgagtgaatagtgctaattctagccaaagtaacatgtt 1886
|||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 601 tggaaattgtgtctctctacttcgagtg-atagtgctaattctagccaaagt-acatgtt 658
Query: 1887 aatactgcaagagagttgcacggactctacgg 1918
||||||| |||||||||||||||||||||||
Sbjct: 659 -atactgc-agagagttgcacggactctacgg 688
>gnl|LJGI|AV428630 homologue to UniRef100_O23045 Cluster: YUP8H12.16 protein; n=1;
Arabidopsis thaliana|Rep: YUP8H12.16 protein -
Arabidopsis thaliana (Mouse-ear cress), partial (9%)
Length = 342
Score = 670 bits (338), Expect = 0.0
Identities = 341/342 (99%)
Strand = Plus / Plus
Query: 13 cacctaatggaagctcatcatcagctccaccaccaccttgacatggctcctcagaacacc 72
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cacctaatggaagctcatcatcagctccaccaccaccttgacatggctcctcagaacacc 60
Query: 73 acctccgagagcgacatcgccgccgcggtgagaatccgtggagaagacgagttcgacagt 132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 acctccgagagcgacatcgccgccgcggtgagaatccgtggagaagacgagttcgacagt 120
Query: 133 gccaccaagtccggcagcgaaaaccaagaaggtggcgcctctggaggagaccaggaccct 192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gccaccaagtccggcagcgaaaaccaagaaggtggcgcctctggaggagaccaggaccct 180
Query: 193 cgtcctaacaagaaaaagcgctaccaccgccacactcagcaccagatccaggaaatggaa 252
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 181 cgtcctaacaagaaaaagcgctaccaccggcacactcagcaccagatccaggaaatggaa 240
Query: 253 tcttttttcaaggagtgcccacaccctgatgacaagcagaggaaggagttgagcagggag 312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tcttttttcaaggagtgcccacaccctgatgacaagcagaggaaggagttgagcagggag 300
Query: 313 ttagggttagagccattgcaggtcaagttttggttccagaac 354
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttagggttagagccattgcaggtcaagttttggttccagaac 342
>gnl|LJGI|TC75175 homologue to UniRef100_A7PXH2 Cluster: Chromosome chr12
scaffold_36, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr12 scaffold_36, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (20%)
Length = 831
Score = 416 bits (210), Expect = e-115
Identities = 406/471 (86%), Gaps = 6/471 (1%)
Strand = Plus / Plus
Query: 115 gaagacgagttcgacagtgccaccaagtccggcagcgaaaaccaagaaggtggcgcctct 174
||||| ||||| ||||| ||||||||||||||||| |||||||| ||||| ||| ||
Sbjct: 367 gaagatgagtttgacagcgccaccaagtccggcagtgaaaaccatgaagg---cgcatcg 423
Query: 175 ggaggagaccaggaccctcgtcctaacaagaaaaagcgctaccaccgccacactcagcac 234
|| | |||||| || || ||| | |||||| ||||| ||||| |||||||| ||||||
Sbjct: 424 ggcgaagaccaagagccacgtgc---caagaagaagcgttaccatcgccacacccagcac 480
Query: 235 cagatccaggaaatggaatcttttttcaaggagtgcccacaccctgatgacaagcagagg 294
|||||||||||||||||| |||||||||||||||| || ||||| ||||||||||| |||
Sbjct: 481 cagatccaggaaatggaagcttttttcaaggagtgtcctcacccagatgacaagcaaagg 540
Query: 295 aaggagttgagcagggagttagggttagagccattgcaggtcaagttttggttccagaac 354
|||||| | ||| |||||||||||||||||||||||||||| ||||||||||| || |||
Sbjct: 541 aaggagctaagccgggagttagggttagagccattgcaggttaagttttggtttcaaaac 600
Query: 355 aagcgcactcagatgaagacacagcatgagaggcaagagaacacgcagcttaggactgac 414
|||||||||||||||||||| || ||||| | || ||||||||| ||| ||||||||
Sbjct: 601 aagcgcactcagatgaagacccaacatgaacgccatgagaacacgtcgctgaggactgaa 660
Query: 415 aatgacaagcttcgtgcggataacatgaggttgagggaagctcttagcaattcttcgtgt 474
||||| |||||||| || ||||||||||||| |||||||||||||||||| | || |||
Sbjct: 661 aatgagaagcttcgagcagataacatgaggtatagggaagctcttagcaatgcatcttgt 720
Query: 475 cctaattgtggtggaccaaccgctattggagaaatgtcatttgatgaacatcacttgagg 534
||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 721 cctaattgtggcggaccaaccgctatnggagaaatgtcatttgatgaacatcacttgagg 780
Query: 535 cttgaaaatgccaggctaagagaagagattgataggatttcagccattgct 585
| || ||||| | || ||||||||||| || ||||||||| | ||||||
Sbjct: 781 atngagaatgcacgtcttagagaagagatngaaaggatttcatcaattgct 831
>gnl|LJGI|TC79311
Length = 767
Score = 186 bits (94), Expect = 4e-46
Identities = 94/94 (100%)
Strand = Plus / Plus
Query: 2130 aaagctttctcttggatctgttgcgacggttaataatctcattgcttgcactgttgagag 2189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaagctttctcttggatctgttgcgacggttaataatctcattgcttgcactgttgagag 60
Query: 2190 gattaaggctgccttgtctggtgaagttgcatga 2223
||||||||||||||||||||||||||||||||||
Sbjct: 61 gattaaggctgccttgtctggtgaagttgcatga 94
>gnl|LJGI|DC596654 similar to UniRef100_A7QUM2 Cluster: Chromosome chr10 scaffold_179,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_179, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (25%)
Length = 567
Score = 182 bits (92), Expect = 6e-45
Identities = 335/416 (80%)
Strand = Plus / Plus
Query: 703 gacatgtatggagccggagagcttctcaggtcaatcagtggacctactgaagctgacaaa 762
||||||||||||| ||||| |||| ||||||||| || || || |||||||| ||
Sbjct: 136 gacatgtatggaggtggagatattctgcggtcaatcaccgggcccacggaagctgataag 195
Query: 763 ccaattataatagagctcgctgtcgcagccatggaggagctcattggaatggcacaaatg 822
||| | ||||||||||| ||||| | ||||||||||||||||| || ||||| ||||||
Sbjct: 196 ccattcataatagagctagctgttgtggccatggaggagctcatagggatggcgcaaatg 255
Query: 823 ggtgagcctctttggctgacctcgctggatggcaccacaaccgtgctcaatgaggatgaa 882
||||| ||||| ||| | | | || ||||| | | ||||| || |||||||||
Sbjct: 256 ggtgatcctctctggttatctacactcgatggatctgatgctgtgctgaacgaggatgaa 315
Query: 883 tacatcaggtcctttccccgaggaattggtcctaagccagatgggttcaagtgtgaggct 942
|||||||| || ||||| |||| ||||| || || || ||| |||| ||||| |||
Sbjct: 316 tacatcagatcatttccaagagggattggaccgaaaccttctggtctcaaatgtgaagct 375
Query: 943 tcacgagaaacttctgttgtcatcatgaaccatgttaacctggttgagattctgatggat 1002
|| || |||||| ||||||| |||||||||||||| | ||| ||||| ||||| ||||||
Sbjct: 376 tctcgtgaaactgctgttgttatcatgaaccatgtcagcctcgttgaaattctcatggat 435
Query: 1003 gtgaaccaatggtccacagtgttctctggtatcgtctcaagggcaatgactctagaagtg 1062
|||||||||||||| || || ||||||| ||| |||||||| ||||||||| | ||||||
Sbjct: 436 gtgaaccaatggtctacggttttctctgctatagtctcaagagcaatgactgttgaagtg 495
Query: 1063 ctatcaactggggtagcgggaaactacaatggtgccttgcaagtgatgacagctga 1118
| ||||||||||| || || ||||||||||| || || |||||||||||||||||
Sbjct: 496 ttgtcaactggggtggccgggaactacaatggcgctttacaagtgatgacagctga 551