Miyakogusa Predicted Gene

Lj3g3v1313780.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v1313780.1 tr|A2Q4H0|A2Q4H0_MEDTR Mitogen-activated protein
kinase kinase kinase A OS=Medicago truncatula
GN=MT,62.17,0,Pkinase,Protein kinase, catalytic domain; seg,NULL;
Protein kinase-like (PK-like),Protein kinase-lik,CUFF.42446.1
         (1213 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC72303 similar to UniRef100_A7PX46 Cluster: Chromosome...    62   9e-09

>gnl|LJGI|TC72303 similar to UniRef100_A7PX46 Cluster: Chromosome chr12 scaffold_36,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr12 scaffold_36, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (18%)
          Length = 487

 Score = 61.9 bits (31), Expect = 9e-09
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                              
Query: 226 tacaatctcttcatggagtacatgcccttcggcac 260
           ||||||||||||||||||||||||||||| |||||
Sbjct: 351 tacaatctcttcatggagtacatgccctttggcac 385



 Score = 52.0 bits (26), Expect = 8e-06
 Identities = 53/62 (85%)
 Strand = Plus / Plus

                                                                       
Query: 289 gaggcggcgatcgcggagtacacacggcagattcttcaggggctggagtacttgcattca 348
           |||||||||||||||   |||||||||||  ||||  ||||||||||| | |||||||||
Sbjct: 423 gaggcggcgatcgcgtgctacacacggcaagttctgaaggggctggagcatttgcattca 482

             
Query: 349 aa 350
           ||
Sbjct: 483 aa 484