Miyakogusa Predicted Gene
- Lj3g3v1297070.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v1297070.1 Non Chatacterized Hit- tr|E1ZHJ8|E1ZHJ8_CHLVA
Putative uncharacterized protein OS=Chlorella variabil,43.14,9e-18,GB
DEF: HYPOTHETICAL PROTEIN AT2G32590,NULL; FAMILY NOT NAMED,NULL;
seg,NULL; Cnd2,Condensin complex,CUFF.42430.1
(2040 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC62790 similar to UniRef100_Q2HT10 Cluster: Barren; n=... 1213 0.0
gnl|LJGI|TC60387 similar to UniRef100_Q2HT10 Cluster: Barren; n=... 1130 0.0
gnl|LJGI|FS353269 similar to UniRef100_Q2HT10 Cluster: Barren; n... 392 e-108
gnl|LJGI|FS329720 similar to UniRef100_Q2HT10 Cluster: Barren; n... 236 4e-61
gnl|LJGI|FS355977 similar to UniRef100_Q2HT10 Cluster: Barren; n... 54 4e-06
>gnl|LJGI|TC62790 similar to UniRef100_Q2HT10 Cluster: Barren; n=1; Medicago
truncatula|Rep: Barren - Medicago truncatula (Barrel
medic), partial (26%)
Length = 887
Score = 1213 bits (612), Expect = 0.0
Identities = 618/620 (99%)
Strand = Plus / Plus
Query: 1421 cagatatcttttgtcctcccaagaattccaaatcgttactgctccctgaaaatagaccac 1480
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cagatatcttttgtcttcccaagaattccaaatcgttactgctccctgaaaatagaccac 60
Query: 1481 cttgtgttacaaaacttccggaggactgccactatgagccacaggatcttgttaagctat 1540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cttgtgttacaaaacttccggaggactgccactatgagccacaggatcttgttaagctat 120
Query: 1541 ttcttttgcctaatgtaaagtgtcttgggaggagggcaagaaagttatcaggtgatgttt 1600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttcttttgcctaatgtaaagtgtcttgggaggagggcaagaaagttatcaggtgatgttt 180
Query: 1601 ctgaagaacaaggcaatgactatgaatcattcccttcctgggataatggaggtgttggtg 1660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ctgaagaacaaggcaatgactatgaatcattcccttcctgggataatggaggtgttggtg 240
Query: 1661 atggcgagtatgatggtgatacgcacagtgacatagatgaccctagcacacttatttctc 1720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atggcgagtatgatggtgatacgcacagtgacatagatgaccctagcacacttatttctc 300
Query: 1721 agcctcgtcgggtcaataaaattgaagtcgactatgacaaaacatccaaacaagttgatg 1780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agcctcgtcgggtcaataaaattgaagtcgactatgacaaaacatccaaacaagttgatg 360
Query: 1781 ttcaggcactgaagattgctctttgggaccatattcaagaatctattcaacttcatgttc 1840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ttcaggcactgaagattgctctttgggaccatattcaagaatctattcaacttcatgttc 420
Query: 1841 caggtgaaaaagaaacggtatctttcagggatatgttgaccaactttcctagctgcaatg 1900
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cgggtgaaaaagaaacggtatctttcagggatatgttgaccaactttcctagctgcaatg 480
Query: 1901 ctgctgcaactgttactgacatatctccgcatttgtgtttcatatgcctattgcatttgg 1960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ctgctgcaactgttactgacatatctccgcatttgtgtttcatatgcctattgcatttgg 540
Query: 1961 ctaatgagaaagggctgagcatcgaaaactgccccaacttggatgatctaagcatatata 2020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ctaatgagaaagggctgagcatcgaaaactgccccaacttggatgatctaagcatatata 600
Query: 2021 tgcctaccttatgttgatgc 2040
||||||||||||||||||||
Sbjct: 601 tgcctaccttatgttgatgc 620
>gnl|LJGI|TC60387 similar to UniRef100_Q2HT10 Cluster: Barren; n=1; Medicago
truncatula|Rep: Barren - Medicago truncatula (Barrel
medic), partial (32%)
Length = 864
Score = 1130 bits (570), Expect = 0.0
Identities = 570/570 (100%)
Strand = Plus / Plus
Query: 225 gaacttcccctcccgagaccccgattctgatccttgtctcaccaaggaccagattctcga 284
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 gaacttcccctcccgagaccccgattctgatccttgtctcaccaaggaccagattctcga 354
Query: 285 cttgttccacaactgcataaagcttgccgccgaaaataaaattaatcagaagaatacatg 344
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 cttgttccacaactgcataaagcttgccgccgaaaataaaattaatcagaagaatacatg 414
Query: 345 ggagttgaaattgattgatcatcttacggatttcataaggactgaagaagaaagcgatgt 404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 ggagttgaaattgattgatcatcttacggatttcataaggactgaagaagaaagcgatgt 474
Query: 405 agagaccaactttcaaattgcaagctgcactcttgaagctggagtcaaaatttattcact 464
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 agagaccaactttcaaattgcaagctgcactcttgaagctggagtcaaaatttattcact 534
Query: 465 aagggtggactcagtgcattctgaggcatataaagtccttgctagaatgaacagagtcgg 524
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 aagggtggactcagtgcattctgaggcatataaagtccttgctagaatgaacagagtcgg 594
Query: 525 ccaagaagctgaggaagactctactctggatagtgttaatgctgaagatggacatgaaga 584
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 ccaagaagctgaggaagactctactctggatagtgttaatgctgaagatggacatgaaga 654
Query: 585 aagcaagaaggggattgacaaaaagttgtcacccttgtcaacattggagtcatcattcga 644
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 aagcaagaaggggattgacaaaaagttgtcacccttgtcaacattggagtcatcattcga 714
Query: 645 ggctcttaatgtaaagaagtttgatgttgcatttgctgtggatcccctctatcgccacac 704
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 ggctcttaatgtaaagaagtttgatgttgcatttgctgtggatcccctctatcgccacac 774
Query: 705 atcagcacaatttgacgaaggtggagctaaaggtctattgatgaataatctcggtgtata 764
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 atcagcacaatttgacgaaggtggagctaaaggtctattgatgaataatctcggtgtata 834
Query: 765 tggtggatgtagggtactctttgattcact 794
||||||||||||||||||||||||||||||
Sbjct: 835 tggtggatgtagggtactctttgattcact 864
Score = 319 bits (161), Expect = 4e-86
Identities = 164/165 (99%)
Strand = Plus / Plus
Query: 1 atgaacccagaatctccctcacacatccgcacttcaatgccggaaaccaccgtaagccct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 atgaacccagaatctccctcacacatccgcacttcaatgccggaaaccaccgtaagccct 130
Query: 61 aatcccacgacggcggctcccagcaagaggcttcccgtcgccgcccgcatactttctccg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 aatcccacgacggcggctcccagcaagaggcttcccgtcgccgcccgcatactttctccg 190
Query: 121 acgtcgccggttttcatcggctccaacgacgaccaggtcgaacgt 165
|||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 191 acgtcgccggttttcatcggctccaacgacgaccaggttgaacgt 235
>gnl|LJGI|FS353269 similar to UniRef100_Q2HT10 Cluster: Barren; n=1; Medicago
truncatula|Rep: Barren - Medicago truncatula (Barrel
medic), partial (9%)
Length = 719
Score = 392 bits (198), Expect = e-108
Identities = 198/198 (100%)
Strand = Plus / Minus
Query: 1843 ggtgaaaaagaaacggtatctttcagggatatgttgaccaactttcctagctgcaatgct 1902
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 ggtgaaaaagaaacggtatctttcagggatatgttgaccaactttcctagctgcaatgct 391
Query: 1903 gctgcaactgttactgacatatctccgcatttgtgtttcatatgcctattgcatttggct 1962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 gctgcaactgttactgacatatctccgcatttgtgtttcatatgcctattgcatttggct 331
Query: 1963 aatgagaaagggctgagcatcgaaaactgccccaacttggatgatctaagcatatatatg 2022
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 aatgagaaagggctgagcatcgaaaactgccccaacttggatgatctaagcatatatatg 271
Query: 2023 cctaccttatgttgatgc 2040
||||||||||||||||||
Sbjct: 270 cctaccttatgttgatgc 253
>gnl|LJGI|FS329720 similar to UniRef100_Q2HT10 Cluster: Barren; n=1; Medicago
truncatula|Rep: Barren - Medicago truncatula (Barrel
medic), partial (28%)
Length = 728
Score = 236 bits (119), Expect = 4e-61
Identities = 380/467 (81%)
Strand = Plus / Plus
Query: 253 gatccttgtctcaccaaggaccagattctcgacttgttccacaactgcataaagcttgcc 312
||||| || |||| |||| | ||||| ||||| |||||||| || ||||| ||||| |||
Sbjct: 261 gatccctgcctcaacaagcagcagatcctcgatttgttccagaattgcatcaagctcgcc 320
Query: 313 gccgaaaataaaattaatcagaagaatacatgggagttgaaattgattgatcatcttacg 372
||| || ||||||||||||||||| || ||||||||||| |||||||| || |||||
Sbjct: 321 agcgagaacaaaattaatcagaagaacacgtgggagttgaacttgattgaccaccttact 380
Query: 373 gatttcataaggactgaagaagaaagcgatgtagagaccaactttcaaattgcaagctgc 432
||| | || | | ||||||| ||| |||| ||||| || || || | ||||| |||
Sbjct: 381 gatattatcaaggctgaagatgaacctgatgcggagactaatttccagaaggcaagttgc 440
Query: 433 actcttgaagctggagtcaaaatttattcactaagggtggactcagtgcattctgaggca 492
|| ||||||||||||||||||||||||||| ||||||| || || |||||||| |||||
Sbjct: 441 acacttgaagctggagtcaaaatttattcattaagggtagattctgtgcattccgaggcg 500
Query: 493 tataaagtccttgctagaatgaacagagtcggccaagaagctgaggaagactctactctg 552
||||||||||||| | | ||||| |||| |||||||| |||||||||||| ||||| |
Sbjct: 501 tataaagtccttggtgggatgaatagagcaggccaagatgctgaggaagacactactgcg 560
Query: 553 gatagtgttaatgctgaagatggacatgaagaaagcaagaaggggattgacaaaaagttg 612
|| ||| ||| |||| |||||| |||| || || ||| | || || |||||||||
Sbjct: 561 gagggtgataacattgaaagtggacaagaaggaaacaggaaagagacagataaaaagttg 620
Query: 613 tcacccttgtcaacattggagtcatcattcgaggctcttaatgtaaagaagtttgatgtt 672
|| || ||||||||| |||| |||| || |||||||||||||||||||||||||| | |
Sbjct: 621 tcgcctttgtcaacactggaaccatcttttgaggctcttaatgtaaagaagtttgacgct 680
Query: 673 gcatttgctgtggatcccctctatcgccacacatcagcacaatttga 719
||||||| ||||||||||||||||||||| || ||||| |||||||
Sbjct: 681 gcatttgttgtggatcccctctatcgccagactacagcaaaatttga 727
>gnl|LJGI|FS355977 similar to UniRef100_Q2HT10 Cluster: Barren; n=1; Medicago
truncatula|Rep: Barren - Medicago truncatula (Barrel
medic), partial (4%)
Length = 372
Score = 54.0 bits (27), Expect = 4e-06
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 1951 ttgcatttggctaatgagaaagggctgagcatcgaaaactgccccaacttggatgatct 2009
||||||||||| |||||||| ||||| ||||| ||| | ||||||||||||||||||
Sbjct: 372 ttgcatttggcaaatgagaatgggcttagcattcaaagcacccccaacttggatgatct 314