Miyakogusa Predicted Gene
- Lj3g3v1296980.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v1296980.1 Non Chatacterized Hit- tr|J3N8H1|J3N8H1_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB11G2,67.92,0.000000000003,FAS1 domain,FAS1 domain; seg,NULL;
FAS1,FAS1 domain; no description,FAS1 domain; Fasciclin,FAS1
doma,CUFF.42417.1
(1371 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP042080 similar to UniRef100_A9XTM1 Cluster: Fasciclin... 599 e-170
gnl|LJGI|TC74952 similar to UniRef100_A9XTM1 Cluster: Fasciclin-... 591 e-168
gnl|LJGI|TC58313 similar to UniRef100_A9XTM0 Cluster: Fasciclin-... 315 4e-85
gnl|LJGI|TC62931 similar to UniRef100_A9XTM0 Cluster: Fasciclin-... 307 1e-82
gnl|LJGI|TC64796 homologue to UniRef100_A7Q060 Cluster: Chromoso... 170 1e-41
gnl|LJGI|TC76210 similar to UniRef100_A9XTL9 Cluster: Fasciclin-... 121 1e-26
>gnl|LJGI|BP042080 similar to UniRef100_A9XTM1 Cluster: Fasciclin-like arabinogalactan
protein 16; n=1; Gossypium hirsutum|Rep: Fasciclin-like
arabinogalactan protein 16 - Gossypium hirsutum (Upland
cotton) (Gossypium mexicanum), partial (18%)
Length = 411
Score = 599 bits (302), Expect = e-170
Identities = 304/305 (99%)
Strand = Plus / Plus
Query: 55 atccccactttagcattaccggagaatccaaaaacaccttcatcaacgagtcagataaac 114
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107 atccccactttagcattaccggagaatccaaaaacaccttcatcaacgagtcagataaac 166
Query: 115 tccaactcagtcctggttgctcttcttgactcgcattacactgaactcgctgagcttgta 174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 tccaactcagtcctggttgctcttcttgactcgcattacactgaactcgctgagcttgta 226
Query: 175 gaaaaggccatgcttctgcagaagctagaagacaccgtcgccgcccacaacatcaccatc 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 gaaaaggccatgcttctgcagaagctagaagacaccgtcgccgcccacaacatcaccatc 286
Query: 235 ttcgcccccaccaacgaagcactggaacgcaacctcgaccctgatttcaaacgcttcctc 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 ttcgcccccaccaacgaagcactggaacgcaacctcgaccctgatttcaaacgcttcctc 346
Query: 295 ctcgaacccggtaatctccactccctccagaccctgcttttgtttcatgtcattccgacc 354
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 347 ctcgaacccggtaatctccactccctccagaccctgctttngtttcatgtcattccgacc 406
Query: 355 cgaat 359
|||||
Sbjct: 407 cgaat 411
>gnl|LJGI|TC74952 similar to UniRef100_A9XTM1 Cluster: Fasciclin-like arabinogalactan
protein 16; n=1; Gossypium hirsutum|Rep: Fasciclin-like
arabinogalactan protein 16 - Gossypium hirsutum (Upland
cotton) (Gossypium mexicanum), partial (26%)
Length = 518
Score = 591 bits (298), Expect = e-168
Identities = 353/371 (95%), Gaps = 4/371 (1%)
Strand = Plus / Plus
Query: 613 gaggttgaccccagaacccaccgattgaagaaaacacctcccgcggcgaaacccggttcc 672
|||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 44 gaggttgaccccagaacccaccgattgaagaaaacaccatccgcggcaaaacccggttcc 103
Query: 673 tcgccggcactcccaatctatgaagctcttgccccaggaccctctcttgctccggcgcca 732
|||||||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 104 tcgccggcacg----atctatgaagctcttgccccgggaccctctcttgctccggcgcca 159
Query: 733 gctccgggccctggtggcccccaccaccacttcaacggcgaggcgcaggtgaaggatttc 792
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 gctccgggacctggtggcccccaccaccacttcaacggcgaggcgcaggtgaaggatttc 219
Query: 793 atccaaaccctgcttcactatggcgggtacaacgagatggctgacattctggtgaacctt 852
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 220 atccaaaccctgcttcactacggcgggtacaacgagatggctgacattctggtgaacctg 279
Query: 853 acgtcgctggctaccgagatgggtcgtttggtgtcggagggttatgttctgactgtatta 912
| |||| ||||||| || |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 280 atgtcgttggctactgaaatgggtcgtttggtgtcggagggttatgttctcactgtatta 339
Query: 913 gctccgaacgatgaggctatggcgaagctgacgacggagcagctgagcgaaccgggtgcg 972
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 gctccgaacgatgaggccatggcgaagctgacgacggagcagctgagcgaaccgggtgcg 399
Query: 973 ccggagcagat 983
|||||||||||
Sbjct: 400 ccggagcagat 410
Score = 121 bits (61), Expect = 1e-26
Identities = 64/65 (98%)
Strand = Plus / Plus
Query: 1233 ggaggaggttaaacccgattcgcagacgggtcaacccgctaaagtggtggttaagcatag 1292
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 443 ggaggaggttaaacccgattcgcaaacgggtcaacccgctaaagtggtggttaagcatag 502
Query: 1293 aagag 1297
|||||
Sbjct: 503 aagag 507
>gnl|LJGI|TC58313 similar to UniRef100_A9XTM0 Cluster: Fasciclin-like arabinogalactan
protein 15; n=1; Gossypium hirsutum|Rep: Fasciclin-like
arabinogalactan protein 15 - Gossypium hirsutum (Upland
cotton) (Gossypium mexicanum), partial (37%)
Length = 1076
Score = 315 bits (159), Expect = 4e-85
Identities = 345/407 (84%)
Strand = Plus / Plus
Query: 808 cactatggcgggtacaacgagatggctgacattctggtgaaccttacgtcgctggctacc 867
||||| |||||||||||||||||||| |||||||| || ||||| || || | || |||
Sbjct: 2 cactacggcgggtacaacgagatggcggacattctcgtcaacctcacctccttagccacc 61
Query: 868 gagatgggtcgtttggtgtcggagggttatgttctgactgtattagctccgaacgatgag 927
|| |||||||| ||||| || || || || ||||| || || | ||||| ||||||||
Sbjct: 62 gaaatgggtcggttggtttccgaaggctacgttctcaccgtcctcgctcccaacgatgaa 121
Query: 928 gctatggcgaagctgacgacggagcagctgagcgaaccgggtgcgccggagcagataatg 987
|| |||||||| ||||||||||||||| |||| ||||| ||||||||||||||||| |||
Sbjct: 122 gccatggcgaaactgacgacggagcagttgagtgaacccggtgcgccggagcagatcatg 181
Query: 988 tactaccatttgataccggagtatcagacggaagagagcatgtacaatgcggtgagaagg 1047
|||||||||||||| ||||||||||||||||| ||||| |||||||||||||| | ||
Sbjct: 182 tactaccatttgatcccggagtatcagacggaggagagtatgtacaatgcggttcggaga 241
Query: 1048 ttcgggaaggtgaactacgataccctgcggttgccgcacaaggtggtggctaaggaggct 1107
|| |||||||||| || ||||| || ||| | ||||| ||||||||||| ||||||||
Sbjct: 242 tttgggaaggtgaggtatgatacgctccggctaccgcataaggtggtggcgcaggaggct 301
Query: 1108 gatgggtcggtcaagttcggccatggagacgggtcggcttatttgttcgacccggatatc 1167
||||||||||| || ||||| || || || ||||||||||||||||||||||||||||||
Sbjct: 302 gatgggtcggtgaaattcgggcacggtgatgggtcggcttatttgttcgacccggatatc 361
Query: 1168 tttaccgatggccggatctcggtccaggggattgacggggttttgtt 1214
|| |||||||| ||||||| || || |||||||| ||||| |||||
Sbjct: 362 ttcaccgatggaaggatctcagtgcaagggattgatggggtgttgtt 408
Score = 93.7 bits (47), Expect = 3e-18
Identities = 95/111 (85%)
Strand = Plus / Plus
Query: 1259 cgggtcaacccgctaaagtggtggttaagcatagaagaggaaaattgttggaagcagcat 1318
|||||||||||||||| || || || ||||| |||||||||||||| | |||||| |||
Sbjct: 471 cgggtcaacccgctaaggttgttgtcaagcaaagaagaggaaaattactagaagcaacat 530
Query: 1319 gcaagatgcttggaacctttggacagcattctagattctcctcttgccaat 1369
|| |||||||||||| ||||||| |||||||||||| ||||||| ||||
Sbjct: 531 gctggatgcttggaacagttggacaacattctagattcacctcttgtcaat 581
>gnl|LJGI|TC62931 similar to UniRef100_A9XTM0 Cluster: Fasciclin-like arabinogalactan
protein 15; n=1; Gossypium hirsutum|Rep: Fasciclin-like
arabinogalactan protein 15 - Gossypium hirsutum (Upland
cotton) (Gossypium mexicanum), partial (63%)
Length = 1281
Score = 307 bits (155), Expect = 1e-82
Identities = 422/511 (82%)
Strand = Plus / Plus
Query: 587 ccgccgtgaagccagaggccgcgccggaggttgaccccagaacccaccgattgaagaaaa 646
||||||||||||||||| ||||||||| ||||||||| ||||||||||| || ||||||
Sbjct: 769 ccgccgtgaagccagagtccgcgccggtggttgacccgagaacccaccggttaaagaaac 828
Query: 647 cacctcccgcggcgaaacccggttcctcgccggcactcccaatctatgaagctcttgccc 706
||| || || |||||| ||||| || || | | || ||||| || || | || |
Sbjct: 829 aaccaccaccgcagaaaccaggttcatcccctgttttaccgatctacgacgcaatggctc 888
Query: 707 caggaccctctcttgctccggcgccagctccgggccctggtggcccccaccaccacttca 766
| || || || || |||||||||||||| || ||||| || || ||||||||||||||||
Sbjct: 889 cgggtccttccctcgctccggcgccagcaccaggccccggcgggccccaccaccacttca 948
Query: 767 acggcgaggcgcaggtgaaggatttcatccaaaccctgcttcactatggcgggtacaacg 826
|||||||||| ||||||||||| |||||||| || || || ||||| |||||||||||||
Sbjct: 949 acggcgaggcccaggtgaaggacttcatccacacgcttctccactacggcgggtacaacg 1008
Query: 827 agatggctgacattctggtgaaccttacgtcgctggctaccgagatgggtcgtttggtgt 886
||||||| |||||||| || ||||| || || | || ||||| |||||||| ||||| |
Sbjct: 1009 agatggcggacattctcgtcaacctcacctccttagccaccgaaatgggtcggttggttt 1068
Query: 887 cggagggttatgttctgactgtattagctccgaacgatgaggctatggcgaagctgacga 946
| || || || ||||| || || | ||||| |||||||| || |||||||| |||||||
Sbjct: 1069 ccgaaggctacgttctcaccgtcctcgctcccaacgatgaagccatggcgaaactgacga 1128
Query: 947 cggagcagctgagcgaaccgggtgcgccggagcagataatgtactaccatttgataccgg 1006
|||||||| |||| ||||| ||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 1129 cggagcagttgagtgaacccggtgcgccggagcagatcatgtactaccatttgatcccgg 1188
Query: 1007 agtatcagacggaagagagcatgtacaatgcggtgagaaggttcgggaaggtgaactacg 1066
||||||||||||| ||||| |||||||||||||| | || || |||||||||| || |
Sbjct: 1189 agtatcagacggaggagagtatgtacaatgcggttcggagatttgggaaggtgaggtatg 1248
Query: 1067 ataccctgcggttgccgcacaaggtggtggc 1097
|||| || ||| | ||||| |||||||||||
Sbjct: 1249 atacgctccggctaccgcataaggtggtggc 1279
Score = 109 bits (55), Expect = 5e-23
Identities = 181/223 (81%)
Strand = Plus / Plus
Query: 104 gtcagataaactccaactcagtcctggttgctcttcttgactcgcattacactgaactcg 163
|||| |||||||||||||| || |||| || ||||| ||||| ||||||||||| || |
Sbjct: 280 gtcaaataaactccaactccatcttggtagcacttctggactcacattacactgagctag 339
Query: 164 ctgagcttgtagaaaaggccatgcttctgcagaagctagaagacaccgtcgccgcccaca 223
| ||||| ||||| || || |||||||| || | ||||| | || || | | | ||||
Sbjct: 340 cagagctcgtagagaaagcaatgcttcttcaaaccttagaacaaacagtgggctctcaca 399
Query: 224 acatcaccatcttcgcccccaccaacgaagcactggaacgcaacctcgaccctgatttca 283
|||||||||||||||| |||| |||||||| || || || | ||||||||||||||||
Sbjct: 400 acatcaccatcttcgctcccaaaaacgaagctctagagcgagatctcgaccctgatttca 459
Query: 284 aacgcttcctcctcgaacccggtaatctccactccctccagac 326
| |||||||||||||||||| | || || ||||| ||||||||
Sbjct: 460 agcgcttcctcctcgaacccagaaaccttcactctctccagac 502
>gnl|LJGI|TC64796 homologue to UniRef100_A7Q060 Cluster: Chromosome chr8 scaffold_41,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_41, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (32%)
Length = 862
Score = 170 bits (86), Expect = 1e-41
Identities = 167/194 (86%)
Strand = Plus / Plus
Query: 865 accgagatgggtcgtttggtgtcggagggttatgttctgactgtattagctccgaacgat 924
||||||||||| | ||||| || || || || ||||| || || || ||||| || ||
Sbjct: 23 accgagatggggaggttggtttctgaaggctacgttctcaccgttttggctcccaatgac 82
Query: 925 gaggctatggcgaagctgacgacggagcagctgagcgaaccgggtgcgccggagcagata 984
||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 83 gaggcgatggcgaagctgacgacggaccagctgagcgaaccgggtgcgccggagcagatc 142
Query: 985 atgtactaccatttgataccggagtatcagacggaagagagcatgtacaatgcggtgaga 1044
|| |||||||| | || || |||||||||||||| ||||| |||||||||||||||||
Sbjct: 143 atctactaccacatcattcccgagtatcagacggaggagagtatgtacaatgcggtgagg 202
Query: 1045 aggttcgggaaggt 1058
||||||||||||||
Sbjct: 203 aggttcgggaaggt 216
>gnl|LJGI|TC76210 similar to UniRef100_A9XTL9 Cluster: Fasciclin-like arabinogalactan
protein 14; n=1; Gossypium hirsutum|Rep: Fasciclin-like
arabinogalactan protein 14 - Gossypium hirsutum (Upland
cotton) (Gossypium mexicanum), partial (39%)
Length = 970
Score = 121 bits (61), Expect = 1e-26
Identities = 184/225 (81%)
Strand = Plus / Plus
Query: 105 tcagataaactccaactcagtcctggttgctcttcttgactcgcattacactgaactcgc 164
|||||| ||||||||||| |||| || |||||||| || || || ||||| ||||||||
Sbjct: 376 tcagatcaactccaactccatcctcgtcgctcttctcgattcccactacaccgaactcgc 435
Query: 165 tgagcttgtagaaaaggccatgcttctgcagaagctagaagacaccgtcgccgcccacaa 224
||||| || || || ||| | || || || || || ||| | |||||| |||||||
Sbjct: 436 cgagctcgtcgagaaagcccttctcctccacaacctcgaacaagccgtcggaacccacaa 495
Query: 225 catcaccatcttcgcccccaccaacgaagcactggaacgcaacctcgaccctgatttcaa 284
|||||||||||||||||||| ||| |||| ||||| ||| ||||||||||||| |||||
Sbjct: 496 catcaccatcttcgcccccagaaaccaagctctggagcgcgacctcgaccctgagttcaa 555
Query: 285 acgcttcctcctcgaacccggtaatctccactccctccagaccct 329
|||||||||||||||||| | ||||||| ||| ||||| |||||
Sbjct: 556 gcgcttcctcctcgaaccccggaatctccgctcactccaaaccct 600