Miyakogusa Predicted Gene

Lj3g3v1295880.2

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v1295880.2 tr|G7IRH1|G7IRH1_MEDTR Ubiquitin
carboxyl-terminal hydrolase OS=Medicago truncatula GN=MTR_2g087710
,80.83,0,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL; Cysteine
proteinases,NULL; seg,NULL; UCH_2_1,Peptid,CUFF.42442.2
         (2448 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC63796 similar to UniRef100_Q9C585 Cluster: Ubiquitin ...  1118   0.0  
gnl|LJGI|TC64823 similar to UniRef100_A7PGA8 Cluster: Ubiquitin ...   337   2e-91

>gnl|LJGI|TC63796 similar to UniRef100_Q9C585 Cluster: Ubiquitin carboxyl-terminal
           hydrolase 8; n=2; Arabidopsis thaliana|Rep: Ubiquitin
           carboxyl-terminal hydrolase 8 - Arabidopsis thaliana
           (Mouse-ear cress), partial (9%)
          Length = 756

 Score = 1118 bits (564), Expect = 0.0
 Identities = 564/564 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgcctgctgcggatttcgataagacgataggaatcgtgtatgcctctttgccaagttct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 atgcctgctgcggatttcgataagacgataggaatcgtgtatgcctctttgccaagttct 252

                                                                       
Query: 61  tcctatgctggtcctatgaagatcatcaataacatcttcaactcagatcttgtcttgaat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 tcctatgctggtcctatgaagatcatcaataacatcttcaactcagatcttgtcttgaat 312

                                                                       
Query: 121 tttcggggtgaggacgattcgcagcacattagtgaaaacggcgaagtgggtgtgtctggc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 tttcggggtgaggacgattcgcagcacattagtgaaaacggcgaagtgggtgtgtctggc 372

                                                                       
Query: 181 cgggacttcgcattggtgtctggggatatgtggttgcaggcactcaagtggcatagtgat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 cgggacttcgcattggtgtctggggatatgtggttgcaggcactcaagtggcatagtgat 432

                                                                       
Query: 241 tcaaaaaatgcaacaaaggatgacaaaggcttttcagctactgacagtgatatgggagat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 tcaaaaaatgcaacaaaggatgacaaaggcttttcagctactgacagtgatatgggagat 492

                                                                       
Query: 301 gtatatcctttacagctcaggctttctattcagacggaaacaagttcatttgcagtcaga 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 gtatatcctttacagctcaggctttctattcagacggaaacaagttcatttgcagtcaga 552

                                                                       
Query: 361 ataagcaaaaaggacaatgcaactgagctctttaaaagagcctgcaaaatgttcagtgtg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 ataagcaaaaaggacaatgcaactgagctctttaaaagagcctgcaaaatgttcagtgtg 612

                                                                       
Query: 421 gattcagagatgttacgcatttgggacttttcaggtcagataaccttctattttatgaat 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 gattcagagatgttacgcatttgggacttttcaggtcagataaccttctattttatgaat 672

                                                                       
Query: 481 ggagaatatcaagtcccaatagacagtcaaaggcagtctgatcaggagattcttctggag 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 ggagaatatcaagtcccaatagacagtcaaaggcagtctgatcaggagattcttctggag 732

                                   
Query: 541 ttgcaagtttatgggttgtcagac 564
           ||||||||||||||||||||||||
Sbjct: 733 ttgcaagtttatgggttgtcagac 756


>gnl|LJGI|TC64823 similar to UniRef100_A7PGA8 Cluster: Ubiquitin carboxyl-terminal
            hydrolase; n=1; Vitis vinifera|Rep: Ubiquitin
            carboxyl-terminal hydrolase - Vitis vinifera (Grape),
            partial (7%)
          Length = 730

 Score =  337 bits (170), Expect = 2e-91
 Identities = 170/170 (100%)
 Strand = Plus / Plus

                                                                        
Query: 2279 atggaagcatgggaggtggtcattatactgcatttgtccatcatggtggtgatcaatggt 2338
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    atggaagcatgggaggtggtcattatactgcatttgtccatcatggtggtgatcaatggt 60

                                                                        
Query: 2339 atgactttgatgatagccgtgtttatcccatcagcaaggagaagataaagtcttcagctg 2398
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   atgactttgatgatagccgtgtttatcccatcagcaaggagaagataaagtcttcagctg 120

                                                              
Query: 2399 cctatgttttgttctatagaagagtttttgaagtatcaacagaatgatag 2448
            ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  cctatgttttgttctatagaagagtttttgaagtatcaacagaatgatag 170