Miyakogusa Predicted Gene
- Lj3g3v1262250.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v1262250.1 tr|Q2VWB7|Q2VWB7_SOLLC Prf interactor 30137
OS=Solanum lycopersicum PE=2 SV=1,58.9,3e-18,bHLH-MYC_N,Transcription
factor MYC/MYB N-terminal; HLH,Helix-loop-helix domain; GB DEF: BHLH
TRANSC,NODE_2913_length_2511_cov_228.956985.path2.1
(2244 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC77688 similar to UniRef100_Q2HVX8 Cluster: Helix-loop... 1019 0.0
gnl|LJGI|FS352562 similar to UniRef100_Q2HVX8 Cluster: Helix-loo... 274 2e-72
gnl|LJGI|TC77387 similar to UniRef100_Q2HVX8 Cluster: Helix-loop... 119 8e-26
>gnl|LJGI|TC77688 similar to UniRef100_Q2HVX8 Cluster: Helix-loop-helix DNA-binding;
n=2; Medicago truncatula|Rep: Helix-loop-helix
DNA-binding - Medicago truncatula (Barrel medic), partial
(30%)
Length = 1157
Score = 1019 bits (514), Expect = 0.0
Identities = 533/538 (99%), Gaps = 1/538 (0%)
Strand = Plus / Plus
Query: 1708 ccctctccatcctgcaagcaggttatgtctgatcatgttgcccagggagcattgtttgat 1767
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 13 ccctctccatcctgcaagcaggttatgtctgatcttgttgcccagggagcattgtttgat 72
Query: 1768 tttcctaagatggggactaaaacaggtgctgtggaagcaagttctcttcggtcagggtgt 1827
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 tttcctaagatggggactaaaacaggtgctgtggaagcaagttctcttcggtcagggtgt 132
Query: 1828 agcaagggtgatgctggaaactgttctcaaagtacttccatatatgggtctcaacttagt 1887
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 agcaagggtgatgctggaaactgttctcaaagtacttccatatatgggtctcaacttagt 192
Query: 1888 tcatgggttgacgacagcagcaatgtgaagcgtgaaaatagtgcttcaactggatactct 1947
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 tcatgggttgacgacagcagcaatgtgaagcgtgaaaatagtgcttcaactggatactct 252
Query: 1948 aagaggccggatgaagcaggcaaaacaaatcgtgaacggcttaaaccaggagagaacgcc 2007
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 253 aagaggccggatgaagcaggcaaaacaaatcgtaaacggcttaaaccaggagagaacccc 312
Query: 2008 aggcctcgacctaaagatcgtctaatgattcaagatcgtgtgaaagagttgagggaaatt 2067
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 313 aggcctcgacctaaagatcgtcaaatgattcaagatcgtgtgaaagagttgagggaaatt 372
Query: 2068 gtgcctaatgg-agcaaaatgtagcatagatgcacttctggaacggaccatcaagcatat 2126
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 gtgcctaatggaagcaaaatgtagcatagatgcacttctggaacggaccatcaagcatat 432
Query: 2127 gcttttcttgcagagtgttacgaagcatgctgacaagttgaaacagacaggggaatctaa 2186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 gcttttcttgcagagtgttacgaagcatgctgacaagttgaaacagacaggggaatctaa 492
Query: 2187 gattgtgagtaaagaaggtggattgctcttaaaagataactttgagggaggggctact 2244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 gattgtgagtaaagaaggtggattgctcttaaaagataactttgagggaggggctact 550
>gnl|LJGI|FS352562 similar to UniRef100_Q2HVX8 Cluster: Helix-loop-helix DNA-binding;
n=2; Medicago truncatula|Rep: Helix-loop-helix
DNA-binding - Medicago truncatula (Barrel medic), partial
(25%)
Length = 751
Score = 274 bits (138), Expect = 2e-72
Identities = 258/298 (86%)
Strand = Plus / Minus
Query: 1910 atgtgaagcgtgaaaatagtgcttcaactggatactctaagaggccggatgaagcaggca 1969
|||||||| |||||||||||| ||||||||||||||| ||| | || ||||| || |
Sbjct: 388 atgtgaagtgtgaaaatagtgtttcaactggatactcgaagcagtcgcgcgaagctggta 329
Query: 1970 aaacaaatcgtgaacggcttaaaccaggagagaacgccaggcctcgacctaaagatcgtc 2029
|| |||||||| || ||||||||| ||||||||| ||||||||||||| |||||||| |
Sbjct: 328 aatcaaatcgtaaaaggcttaaactaggagagaatcccaggcctcgaccaaaagatcgcc 269
Query: 2030 taatgattcaagatcgtgtgaaagagttgagggaaattgtgcctaatggagcaaaatgta 2089
||||||||||||||||||||||||| | | ||| ||||||| ||||||| ||||||||
Sbjct: 268 aaatgattcaagatcgtgtgaaagagctacgagaacttgtgccaaatggagaaaaatgta 209
Query: 2090 gcatagatgcacttctggaacggaccatcaagcatatgcttttcttgcagagtgttacga 2149
||||||||||||| |||||| ||||||| |||||||||| |||| |||| ||||| || |
Sbjct: 208 gcatagatgcactactggaaaggaccataaagcatatgcgtttcatgcaaagtgtgacaa 149
Query: 2150 agcatgctgacaagttgaaacagacaggggaatctaagattgtgagtaaagaaggtgg 2207
|||||||||||||| |||||||||||||||| ||||||||| | ||||| ||||||||
Sbjct: 148 agcatgctgacaagctgaaacagacaggggagtctaagattattagtaaggaaggtgg 91
>gnl|LJGI|TC77387 similar to UniRef100_Q2HVX8 Cluster: Helix-loop-helix DNA-binding;
n=2; Medicago truncatula|Rep: Helix-loop-helix
DNA-binding - Medicago truncatula (Barrel medic),
partial (17%)
Length = 899
Score = 119 bits (60), Expect = 8e-26
Identities = 180/220 (81%)
Strand = Plus / Plus
Query: 31 ggtgaagggatacttggacgggcagcgtttacaggaaatcatcagtggattctttttaac 90
|||||||| || |||||||||| || ||| |||| | ||||||||||||||||| ||
Sbjct: 672 ggtgaaggtatgattggacgggctgcattttcaggcagccatcagtggattcttttgtac 731
Query: 91 aatttcactagtgatgcatatccaccagatgtatgtacagagttgcatcaccaattttca 150
|||||||||| |||||||||||||| || ||| | | || || ||||||| |||||
Sbjct: 732 aatttcactacagatgcatatccacctgaggtaaatgctgaagtgtttcaccaaatttca 791
Query: 151 gctggaatgcagacggtagcggttattcctgtgcttccccatggggttgtccaacttgga 210
|||||||||||||| ||||| |||||||||||||| || || || ||||| ||||||||
Sbjct: 792 gctggaatgcagacagtagcagttattcctgtgctgcctcacggcgttgttcaacttggt 851
Query: 211 tctatcttgcctattatggaaaatatgagatttgtgaatg 250
|| ||||||| || ||||| ||| || ||||| ||||||
Sbjct: 852 tcattcttgccaataatggagaatttgggatttttgaatg 891