Miyakogusa Predicted Gene

Lj3g3v1262240.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v1262240.1 Non Chatacterized Hit- tr|Q0WVQ5|Q0WVQ5_ARATH
Putative uncharacterized protein At1g64625 OS=Arabidop,54.76,3e-19,GB
DEF: BHLH TRANSCRIPTION FACTOR,NULL; SERINE/THREONINE-PROTEIN KINASE
WNK (WITH NO
LYSINE)-RELATED,NODE_36847_length_1039_cov_246.334930.path1.1
         (324 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC77688 similar to UniRef100_Q2HVX8 Cluster: Helix-loop...   642   0.0  
gnl|LJGI|TC79643 similar to UniRef100_A7PGE2 Cluster: Chromosome...    86   2e-16

>gnl|LJGI|TC77688 similar to UniRef100_Q2HVX8 Cluster: Helix-loop-helix DNA-binding;
           n=2; Medicago truncatula|Rep: Helix-loop-helix
           DNA-binding - Medicago truncatula (Barrel medic),
           partial (30%)
          Length = 1157

 Score =  642 bits (324), Expect = 0.0
 Identities = 324/324 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggtgtgccctatcatagttgaggatcttaatcctcctcgccagatgctagtggagatg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 atggtgtgccctatcatagttgaggatcttaatcctcctcgccagatgctagtggagatg 637

                                                                       
Query: 61  ctctgcgaggaacgaggtttctttctggaaatagctgacttaataagaggattaggttta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 ctctgcgaggaacgaggtttctttctggaaatagctgacttaataagaggattaggttta 697

                                                                       
Query: 121 acaatcttgaagggggtcatggaagcccgcaatgacaagatctgggcacgctttgctgtt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 698 acaatcttgaagggggtcatggaagcccgcaatgacaagatctgggcacgctttgctgtt 757

                                                                       
Query: 181 gaggcaaacagggatgtgacaaggatggaaatattcatgtcactagttcaacttgtggaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 758 gaggcaaacagggatgtgacaaggatggaaatattcatgtcactagttcaacttgtggaa 817

                                                                       
Query: 241 caaacagtgaagggtggtgcatcttcatctaatgcagttgacaacaacatgatggtttat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 818 caaacagtgaagggtggtgcatcttcatctaatgcagttgacaacaacatgatggtttat 877

                                   
Query: 301 cattctttcccgcaagccacctag 324
           ||||||||||||||||||||||||
Sbjct: 878 cattctttcccgcaagccacctag 901


>gnl|LJGI|TC79643 similar to UniRef100_A7PGE2 Cluster: Chromosome chr6 scaffold_15,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr6 scaffold_15, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (4%)
          Length = 695

 Score = 85.7 bits (43), Expect = 2e-16
 Identities = 43/43 (100%)
 Strand = Plus / Plus

                                                      
Query: 282 caacaacatgatggtttatcattctttcccgcaagccacctag 324
           |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2   caacaacatgatggtttatcattctttcccgcaagccacctag 44