Miyakogusa Predicted Gene

Lj3g3v1261190.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v1261190.1 tr|Q2HSH7|Q2HSH7_MEDTR Histone deacetylase
OS=Medicago truncatula GN=MTR_2g087270 PE=4
SV=1,86.23,0,Arginase/deacetylase,NULL; HDASUPER,Histone deacetylase
superfamily; no description,Histone deacetyl,CUFF.42389.1
         (1158 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP079770 similar to UniRef100_Q2HSH7 Cluster: Histone d...   630   e-180
gnl|LJGI|DC599356 similar to UniRef100_Q2HSH7 Cluster: Histone d...   472   e-132

>gnl|LJGI|BP079770 similar to UniRef100_Q2HSH7 Cluster: Histone deacetylase superfamily;
            n=1; Medicago truncatula|Rep: Histone deacetylase
            superfamily - Medicago truncatula (Barrel medic), partial
            (27%)
          Length = 459

 Score =  630 bits (318), Expect = e-180
 Identities = 318/318 (100%)
 Strand = Plus / Minus

                                                                        
Query: 841  caggactcaagtgcatttgatccaaatggaaggcaatgcttaacaatggagggctacaga 900
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459  caggactcaagtgcatttgatccaaatggaaggcaatgcttaacaatggagggctacaga 400

                                                                        
Query: 901  gaaattgggcgaatagttcatggtcttgcagcaaagcacagtgatggacgccttctaatt 960
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399  gaaattgggcgaatagttcatggtcttgcagcaaagcacagtgatggacgccttctaatt 340

                                                                        
Query: 961  gtccaggaaggtggatatcatgtcacgtattcagcatattgtttgcatgcaacacttgag 1020
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339  gtccaggaaggtggatatcatgtcacgtattcagcatattgtttgcatgcaacacttgag 280

                                                                        
Query: 1021 ggcgttctcaaccttccattacctctactacctgatcctattgcttattatccagaggac 1080
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279  ggcgttctcaaccttccattacctctactacctgatcctattgcttattatccagaggac 220

                                                                        
Query: 1081 gagacatttcctgtcaaagttatagaagccattaaaaattatatgaaagatgaagtgcat 1140
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219  gagacatttcctgtcaaagttatagaagccattaaaaattatatgaaagatgaagtgcat 160

                              
Query: 1141 ttgtggaaagcagcttag 1158
            ||||||||||||||||||
Sbjct: 159  ttgtggaaagcagcttag 142


>gnl|LJGI|DC599356 similar to UniRef100_Q2HSH7 Cluster: Histone deacetylase
           superfamily; n=1; Medicago truncatula|Rep: Histone
           deacetylase superfamily - Medicago truncatula (Barrel
           medic), partial (21%)
          Length = 271

 Score =  472 bits (238), Expect = e-132
 Identities = 256/262 (97%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggctactgacactgatgcagcttcttcttccatggtgaaccgcgttgacgttttctgg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10  atggctactgacactgatgcagcttcttcttccatggtgaaccgcgttgacgttttctgg 69

                                                                       
Query: 61  catgaagggatgctcaaccatgacactggtcatggagtgtttgactcaggaatcaaccca 120
           ||||||||||||||||||||||||||||||||||||||||||||||| ||   |||||||
Sbjct: 70  catgaagggatgctcaaccatgacactggtcatggagtgtttgactcggggggcaaccca 129

                                                                       
Query: 121 ggcttcttggacgtgttggagaaacatcctgaaaactctgacagggtcaagaacatggtc 180
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 130 ggcttcttggacgtgttggacaaacatcctgaaaactctgacagggtcaagaacatggtc 189

                                                                       
Query: 181 tccatcctcaaaagaggtcccatttccccttacatttcctggaacattggaagatctgct 240
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 tccatcctcaaaagaagtcccatttccccttacatttcctggaacattggaagatctgct 249

                                 
Query: 241 ctaatccatgaactccattctt 262
           ||||||||||||||||||||||
Sbjct: 250 ctaatccatgaactccattctt 271