Miyakogusa Predicted Gene

Lj3g3v1238810.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v1238810.1 Non Chatacterized Hit- tr|F6HYA9|F6HYA9_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,53.85,8e-17,seg,NULL,NODE_46642_length_363_cov_69.446281.path1.1
         (366 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC70404 similar to UniRef100_A7P749 Cluster: Chromosome...   454   e-127

>gnl|LJGI|TC70404 similar to UniRef100_A7P749 Cluster: Chromosome chr9 scaffold_7,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr9 scaffold_7, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (15%)
          Length = 794

 Score =  454 bits (229), Expect = e-127
 Identities = 229/229 (100%)
 Strand = Plus / Plus

                                                                       
Query: 130 acgaataataataagccgcaggaggttgtggtcgatgagaacgtagttgttgtgccgaag 189
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 acgaataataataagccgcaggaggttgtggtcgatgagaacgtagttgttgtgccgaag 548

                                                                       
Query: 190 aaggaagaagagaatcggggtggagcggagaaggaagtggttgcggagaaacagatggat 249
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 aaggaagaagagaatcggggtggagcggagaaggaagtggttgcggagaaacagatggat 608

                                                                       
Query: 250 gacagtggtggtcgcagcaatgataaggccgttgccggtgaagatgaaagcaccgccctt 309
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 gacagtggtggtcgcagcaatgataaggccgttgccggtgaagatgaaagcaccgccctt 668

                                                            
Query: 310 gtgattcctgataaggttcaagtaggtaattcccctttgtataaagtag 358
           |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 gtgattcctgataaggttcaagtaggtaattcccctttgtataaagtag 717



 Score =  204 bits (103), Expect = 3e-52
 Identities = 103/103 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgccggtgctgcgtagtggagcgcgccggggccgggcagcagcgaagcaaggagagcgg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 atgccggtgctgcgtagtggagcgcgccggggccgggcagcagcgaagcaaggagagcgg 419

                                                      
Query: 61  cgggagagtccggttgaaggtgaagcgattgcgacgaggacga 103
           |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 cgggagagtccggttgaaggtgaagcgattgcgacgaggacga 462