Miyakogusa Predicted Gene

Lj3g3v1238790.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v1238790.1 tr|F2DVP6|F2DVP6_HORVD Predicted protein
OS=Hordeum vulgare var. distichum PE=2 SV=1,32.52,0.00000004,SUBFAMILY
NOT NAMED,NULL; CASEIN
KINASE-RELATED,NULL,NODE_48898_length_1012_cov_135.481232.path1.1
         (489 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC65665 similar to UniRef100_A7P4B5 Cluster: Chromosome...   930   0.0  

>gnl|LJGI|TC65665 similar to UniRef100_A7P4B5 Cluster: Chromosome chr4 scaffold_6,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr4 scaffold_6, whole genome shotgun sequence
            - Vitis vinifera (Grape), partial (48%)
          Length = 1262

 Score =  930 bits (469), Expect = 0.0
 Identities = 469/469 (100%)
 Strand = Plus / Plus

                                                                        
Query: 21   ttactacatcagcgctattgctggagctgtgaatgggagttcattagtagtaatgtctaa 80
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563  ttactacatcagcgctattgctggagctgtgaatgggagttcattagtagtaatgtctaa 622

                                                                        
Query: 81   gggcacaccatatacgcagcaatcgtacaaagttagtgattcatttcctttcaagtggat 140
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623  gggcacaccatatacgcagcaatcgtacaaagttagtgattcatttcctttcaagtggat 682

                                                                        
Query: 141  taacaaaaagtggcgggagggcttttacgttactgcaatggccacctcgagcatcagatg 200
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683  taacaaaaagtggcgggagggcttttacgttactgcaatggccacctcgagcatcagatg 742

                                                                        
Query: 201  gggagtagttatgtctcgcggtgcaggattttcagaccaggttgttgaactagattttct 260
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743  gggagtagttatgtctcgcggtgcaggattttcagaccaggttgttgaactagattttct 802

                                                                        
Query: 261  gtatcctagcgaagggattcacaagcggtgggattgtggataccgaatcacatcgactgc 320
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803  gtatcctagcgaagggattcacaagcggtgggattgtggataccgaatcacatcgactgc 862

                                                                        
Query: 321  tgcaactgcagaccaagctgcttttgtcttgagcgtgcctaggaggaaacccacagatga 380
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 863  tgcaactgcagaccaagctgcttttgtcttgagcgtgcctaggaggaaacccacagatga 922

                                                                        
Query: 381  aactcaggaaacactaaggaccactgcttttcctagtacacatgtcaaggagaaatgggc 440
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 923  aactcaggaaacactaaggaccactgcttttcctagtacacatgtcaaggagaaatgggc 982

                                                             
Query: 441  gaagaacctgtacattgcttctgtttgctacggacgcacagtttcttga 489
            |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 983  gaagaacctgtacattgcttctgtttgctacggacgcacagtttcttga 1031