Miyakogusa Predicted Gene

Lj3g3v1204550.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v1204550.1 Non Chatacterized Hit- tr|D8TQG4|D8TQG4_VOLCA
Putative uncharacterized protein OS=Volvox carteri
GN=,25.48,0.0003,seg,NULL,CUFF.42351.1
         (1008 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC65780 similar to UniRef100_A7QF72 Cluster: Chromosome...  1998   0.0  

>gnl|LJGI|TC65780 similar to UniRef100_A7QF72 Cluster: Chromosome undetermined
            scaffold_87, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome undetermined scaffold_87, whole
            genome shotgun sequence - Vitis vinifera (Grape), partial
            (80%)
          Length = 1421

 Score = 1998 bits (1008), Expect = 0.0
 Identities = 1008/1008 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1    atgaaggagcttgcacagttccacaacatggataccctttcaaggattacattcttctct 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98   atgaaggagcttgcacagttccacaacatggataccctttcaaggattacattcttctct 157

                                                                        
Query: 61   gcttctcacaaccttaaccttccaaaaaatcatgccatttcacctttcccatgttctttt 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158  gcttctcacaaccttaaccttccaaaaaatcatgccatttcacctttcccatgttctttt 217

                                                                        
Query: 121  tccaccaaaacaagtaccccattggcttcagtcttaagagctggtcctccttcacctgca 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218  tccaccaaaacaagtaccccattggcttcagtcttaagagctggtcctccttcacctgca 277

                                                                        
Query: 181  gtgagtgatgcagaagaggaagtgttgcaaatgtttttcaaggagagagaattaaatgga 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278  gtgagtgatgcagaagaggaagtgttgcaaatgtttttcaaggagagagaattaaatgga 337

                                                                        
Query: 241  gattttatatcaaaagcttctgatatattatggctgaggaaattcagaagttctgttgat 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338  gattttatatcaaaagcttctgatatattatggctgaggaaattcagaagttctgttgat 397

                                                                        
Query: 301  tctgatattagcaacctcactaacaacaatgctgcctctcagcaaatagaactggagcag 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398  tctgatattagcaacctcactaacaacaatgctgcctctcagcaaatagaactggagcag 457

                                                                        
Query: 361  agcattgagagcaacagtgataatggtagtgctagtggctttttgaaactttcaacaacc 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458  agcattgagagcaacagtgataatggtagtgctagtggctttttgaaactttcaacaacc 517

                                                                        
Query: 421  caggagtgggtgctaggtgatgagtctgcaccacgaaacaagagaatgactgctaagatg 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518  caggagtgggtgctaggtgatgagtctgcaccacgaaacaagagaatgactgctaagatg 577

                                                                        
Query: 481  ttgcaagacagcagcgaaagaagaaagaaactgaacattctccaatatgaatctctcaag 540
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578  ttgcaagacagcagcgaaagaagaaagaaactgaacattctccaatatgaatctctcaag 637

                                                                        
Query: 541  agggaactacttcttgtatcggtggccgttggacttgcttgtagtggatattgcttgctg 600
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638  agggaactacttcttgtatcggtggccgttggacttgcttgtagtggatattgcttgctg 697

                                                                        
Query: 601  gttttttcagtgcaggctgctataagttatgcaattggtgtccttttcagtttcttgtac 660
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 698  gttttttcagtgcaggctgctataagttatgcaattggtgtccttttcagtttcttgtac 757

                                                                        
Query: 661  cttctgctcttgtatcaacatgcagacaacctctccagtgaaagtgttcctcaaatattc 720
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 758  cttctgctcttgtatcaacatgcagacaacctctccagtgaaagtgttcctcaaatattc 817

                                                                        
Query: 721  aggaaaaagaagtcaaagaaaattggtataagaagtgaggaccttcaagattcattggag 780
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 818  aggaaaaagaagtcaaagaaaattggtataagaagtgaggaccttcaagattcattggag 877

                                                                        
Query: 781  cggtccatcaagggttgcagcatggcactttcatctccaaggcttgtgatcccagcgaca 840
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 878  cggtccatcaagggttgcagcatggcactttcatctccaaggcttgtgatcccagcgaca 937

                                                                        
Query: 841  atttatggactttgggctctgtctcatcggtatttcaccaatgatttctttgattttcag 900
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 938  atttatggactttgggctctgtctcatcggtatttcaccaatgatttctttgattttcag 997

                                                                        
Query: 901  cttgtgccggctatgtttgggatgtttgtctacaaggctgcagctctagtgcaagtttat 960
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 998  cttgtgccggctatgtttgggatgtttgtctacaaggctgcagctctagtgcaagtttat 1057

                                                            
Query: 961  agagacaatgaagacttgcagcttgtatttccagaaaatgaggattga 1008
            ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1058 agagacaatgaagacttgcagcttgtatttccagaaaatgaggattga 1105