Miyakogusa Predicted Gene
- Lj3g3v1182320.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v1182320.1 tr|G7ITU0|G7ITU0_MEDTR Calpain-B OS=Medicago
truncatula GN=MTR_2g086560 PE=4 SV=1,72.06,0,seg,NULL; EF-hand,
calcium binding motif,Calcium-binding EF-hand; no
description,EF-hand-like domain,CUFF.42332.1
(762 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC70543 similar to UniRef100_A7QFB0 Cluster: Chromosome... 1511 0.0
gnl|LJGI|TC77335 similar to UniRef100_Q8GT88 Cluster: Fiber prot... 250 1e-65
gnl|LJGI|FS360623 similar to UniRef100_Q8GT88 Cluster: Fiber pro... 224 6e-58
gnl|LJGI|BP061591 135 4e-31
>gnl|LJGI|TC70543 similar to UniRef100_A7QFB0 Cluster: Chromosome undetermined
scaffold_87, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_87, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (80%)
Length = 1740
Score = 1511 bits (762), Expect = 0.0
Identities = 762/762 (100%)
Strand = Plus / Plus
Query: 1 atgtcttacggtagatacaatcctcaatctccgtctcaatcgtacgctccctctgcacct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 atgtcttacggtagatacaatcctcaatctccgtctcaatcgtacgctccctctgcacct 179
Query: 61 gagttaccggcgtattcctcccctccgccgcactccgccgcttacacccaatctccatct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 gagttaccggcgtattcctcccctccgccgcactccgccgcttacacccaatctccatct 239
Query: 121 cacgctccaccgcattcaagctacaattctagtcatggttacggacaagctccaccatcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 cacgctccaccgcattcaagctacaattctagtcatggttacggacaagctccaccatcg 299
Query: 181 tcatctggttatcctccttcttcttctggtggtgggtattcgtcgtttccaccagggacg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 tcatctggttatcctccttcttcttctggtggtgggtattcgtcgtttccaccagggacg 359
Query: 241 caccctgaagtgattagggcttttcagatggtggatagggatcagagtggcttcatcgat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 caccctgaagtgattagggcttttcagatggtggatagggatcagagtggcttcatcgat 419
Query: 301 gagaaggagttgcagcaggttcttacctccgggtttcagaaattcaacattgggactatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 gagaaggagttgcagcaggttcttacctccgggtttcagaaattcaacattgggactatt 479
Query: 361 cgtctcctcatgtttctcttcaagcacccaaatgagcctctcagagttggtcctaaggaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 cgtctcctcatgtttctcttcaagcacccaaatgagcctctcagagttggtcctaaggaa 539
Query: 421 tttgcagcactctggaattgccttggacattggcgaggcatatttgagagatatgataaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 tttgcagcactctggaattgccttggacattggcgaggcatatttgagagatatgataaa 599
Query: 481 gataggagtgggaaaattgatccattagagctaagagatgctctatatggtattggctat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 gataggagtgggaaaattgatccattagagctaagagatgctctatatggtattggctat 659
Query: 541 gctgtaccaggctcggttctacaacttctgctttcaaagtatagtgatggaactggtcgg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 gctgtaccaggctcggttctacaacttctgctttcaaagtatagtgatggaactggtcgg 719
Query: 601 cgggttgaacttggttttgacagttttgtcgagtgtgggatgattatcaagggtctgact 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 cgggttgaacttggttttgacagttttgtcgagtgtgggatgattatcaagggtctgact 779
Query: 661 gacaaattcaaggagaaggacacgcgttataccggttcggctacactttcatacgacgcc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 gacaaattcaaggagaaggacacgcgttataccggttcggctacactttcatacgacgcc 839
Query: 721 tttatgtctatggtcattcctttccttgtatcttatgactga 762
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 840 tttatgtctatggtcattcctttccttgtatcttatgactga 881
>gnl|LJGI|TC77335 similar to UniRef100_Q8GT88 Cluster: Fiber protein Fb1; n=1;
Gossypium barbadense|Rep: Fiber protein Fb1 - Gossypium
barbadense (Sea-island cotton) (Egyptian cotton),
partial (39%)
Length = 533
Score = 250 bits (126), Expect = 1e-65
Identities = 129/130 (99%)
Strand = Plus / Minus
Query: 633 gtgtgggatgattatcaagggtctgactgacaaattcaaggagaaggacacgcgttatac 692
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 369 gtgtgggatgattatcaagggtctgactgaccaattcaaggagaaggacacgcgttatac 310
Query: 693 cggttcggctacactttcatacgacgcctttatgtctatggtcattcctttccttgtatc 752
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 cggttcggctacactttcatacgacgcctttatgtctatggtcattcctttccttgtatc 250
Query: 753 ttatgactga 762
||||||||||
Sbjct: 249 ttatgactga 240
>gnl|LJGI|FS360623 similar to UniRef100_Q8GT88 Cluster: Fiber protein Fb1; n=1;
Gossypium barbadense|Rep: Fiber protein Fb1 - Gossypium
barbadense (Sea-island cotton) (Egyptian cotton),
partial (33%)
Length = 665
Score = 224 bits (113), Expect = 6e-58
Identities = 113/113 (100%)
Strand = Plus / Minus
Query: 650 agggtctgactgacaaattcaaggagaaggacacgcgttataccggttcggctacacttt 709
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 agggtctgactgacaaattcaaggagaaggacacgcgttataccggttcggctacacttt 294
Query: 710 catacgacgcctttatgtctatggtcattcctttccttgtatcttatgactga 762
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 catacgacgcctttatgtctatggtcattcctttccttgtatcttatgactga 241
>gnl|LJGI|BP061591
Length = 355
Score = 135 bits (68), Expect = 4e-31
Identities = 82/84 (97%), Gaps = 2/84 (2%)
Strand = Plus / Plus
Query: 1 atgtcttacggtagatacaatcctcaatctccgtctcaatcgtacgctccctctgcacct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 atgtcttacggtagatacaatcctcaatctccgtctcaatcgtacgctccctctgcacct 159
Query: 61 ga-gttaccggcg-tattcctccc 82
|| |||||||||| ||||||||||
Sbjct: 160 gaggttaccggcgatattcctccc 183