Miyakogusa Predicted Gene
- Lj3g3v1145920.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v1145920.1 Non Chatacterized Hit- tr|A9NPB9|A9NPB9_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,59.65,2e-19,Ribosomal_60s,Ribosomal protein 60S; seg,NULL; 60S
ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER,NULL,CUFF.42299.1
(342 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67622 similar to UniRef100_Q5YJR8 Cluster: 60S acidic... 678 0.0
gnl|LJGI|TC66019 similar to UniRef100_A7PPG7 Cluster: Chromosome... 105 2e-22
>gnl|LJGI|TC67622 similar to UniRef100_Q5YJR8 Cluster: 60S acidic ribosomal protein;
n=1; Hyacinthus orientalis|Rep: 60S acidic ribosomal
protein - Hyacinthus orientalis (Common hyacinth),
partial (83%)
Length = 563
Score = 678 bits (342), Expect = 0.0
Identities = 342/342 (100%)
Strand = Plus / Plus
Query: 1 atgaaggtcatcgctgcttatttgcttgccgttttgggagggaattcatccccttcagct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52 atgaaggtcatcgctgcttatttgcttgccgttttgggagggaattcatccccttcagct 111
Query: 61 cttgatctcaagaacattcttggctctgttggggttgatgctgaggaagatttgattcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 112 cttgatctcaagaacattcttggctctgttggggttgatgctgaggaagatttgattcag 171
Query: 121 ttgctcctaaccgaagtcaagggaaaagattttgccgagataattgctagtgggagagaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 ttgctcctaaccgaagtcaagggaaaagattttgccgagataattgctagtgggagagaa 231
Query: 181 aagttgtctgcagtgccttctggtggtggtgctgtcgccgttgcggctgcacctgctgcg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232 aagttgtctgcagtgccttctggtggtggtgctgtcgccgttgcggctgcacctgctgcg 291
Query: 241 gaagctggtggtgctgcacctgcagaagcaaaggaggagaagaaggaggaagcaaaggat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 gaagctggtggtgctgcacctgcagaagcaaaggaggagaagaaggaggaagcaaaggat 351
Query: 301 gagtcggatgatgatttgggtttcagtttatttgactgaaaa 342
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 gagtcggatgatgatttgggtttcagtttatttgactgaaaa 393
>gnl|LJGI|TC66019 similar to UniRef100_A7PPG7 Cluster: Chromosome chr8 scaffold_23,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_23, whole genome shotgun
sequence - Vitis vinifera (Grape), complete
Length = 632
Score = 105 bits (53), Expect = 2e-22
Identities = 273/346 (78%), Gaps = 9/346 (2%)
Strand = Plus / Plus
Query: 1 atgaaggtcatcgctgcttatttgcttgccgttttgggagggaattcatccccttcagct 60
|||||||| |||| ||||| ||||| || |||||||| || ||||| ||||| || ||
Sbjct: 58 atgaaggtagtcgccgcttacttgctcgctgttttgggtggcaattcttccccctccgcc 117
Query: 61 cttgatctcaagaacattcttggctctgttggggttgatgctgaggaagatttgattcag 120
||||||||| ||||| |||||||| ||||| |||| ||| || || |||||| ||
Sbjct: 118 gatgatctcaaaaacatccttggctcagttggaattgagattgaagatgagttgattgag 177
Query: 121 ttgctcctaaccgaagtcaagggaaaagattttgccgagataattgctagtgggagagaa 180
|||||| | | ||||||||||| || || || |||||| | ||||| ||||| ||||||
Sbjct: 178 ttgctcttgaaagaagtcaagggcaaggacttcgccgagctgattgccagtggtagagaa 237
Query: 181 aagttgtctgcagtgccttctggtggtggtgctgtcgccgttgcggctgcacct------ 234
||||||||||| |||||||| |||||| |||||| | ||||| |||| | ||
Sbjct: 238 aagttgtctgctgtgccttccggtggtattgctgtttctgttgctgctgtatctggagga 297
Query: 235 gctgcggaagctggtggtgctgcac---ctgcagaagcaaaggaggagaagaaggaggaa 291
| ||| | ||||||||| || || | |||| |||||||||||||| |||||||| | |
Sbjct: 298 ggtgctgcagctggtggcgcggctcctgctgctgaagcaaaggaggaaaagaaggaagta 357
Query: 292 gcaaaggatgagtcggatgatgatttgggtttcagtttatttgact 337
| ||||| ||||| ||||||||| |||||||||||||||| ||||
Sbjct: 358 gagaaggaagagtctgatgatgatatgggtttcagtttattcgact 403