Miyakogusa Predicted Gene

Lj3g3v1145880.3
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v1145880.3 Non Chatacterized Hit- tr|F6HHH5|F6HHH5_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,41.67,8e-17,no
description,Signal transduction histidine kinase, phosphotransfer
(Hpt) domain; Histidine-contain,CUFF.42290.3
         (342 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC70464                                                      204   3e-52
gnl|LJGI|AV777423 similar to UniRef100_A7UU57 Cluster: AGAP00621...    66   1e-10

>gnl|LJGI|TC70464 
          Length = 533

 Score =  204 bits (103), Expect = 3e-52
 Identities = 160/179 (89%)
 Strand = Plus / Plus

                                                                       
Query: 61  atagaaacttatttggccgatgttgatatgatcctttctgaactttctctccatgttgat 120
           ||||||| ||||||||| ||||||||| ||||||| ||||||||||||| ||||||||||
Sbjct: 1   atagaaagttatttggctgatgttgatgtgatcctgtctgaactttctcgccatgttgat 60

                                                                       
Query: 121 aattcacaagttgacctctatatgttggctaccctagctcatgaaatacaggataagagc 180
           |||||||| |||||| |||||||||||| | ||||||||| |||| |||| |||||||||
Sbjct: 61  aattcacatgttgacttctatatgttgggttccctagctcgtgaagtacatgataagagc 120

                                                                      
Query: 181 accagcattggtgcagagcatatgactgttgcatgttttgatgtcattaaagcttgtga 239
           || |||||||||||||| |||||||   ||||||||||||||||||||  |||||||||
Sbjct: 121 acaagcattggtgcagatcatatgaggcttgcatgttttgatgtcattgcagcttgtga 179


>gnl|LJGI|AV777423 similar to UniRef100_A7UU57 Cluster: AGAP006216-PA; n=1; Anopheles
           gambiae str. PEST|Rep: AGAP006216-PA - Anopheles gambiae
           str. PEST, partial (3%)
          Length = 597

 Score = 65.9 bits (33), Expect = 1e-10
 Identities = 51/57 (89%)
 Strand = Plus / Minus

                                                                    
Query: 183 cagcattggtgcagagcatatgactgttgcatgttttgatgtcattaaagcttgtga 239
           ||||||||||||||| |||||||   ||||||||||||||||||||  |||||||||
Sbjct: 406 cagcattggtgcagatcatatgaggcttgcatgttttgatgtcattgcagcttgtga 350