Miyakogusa Predicted Gene

Lj3g3v1131280.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v1131280.1 Non Chatacterized Hit- tr|I1LTQ5|I1LTQ5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.1492 PE=,97.86,0,ARM
repeat,Armadillo-type fold; Adaptin_N,Clathrin/coatomer adaptor,
adaptin-like, N-terminal; no de,CUFF.42271.1
         (1449 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC76962 homologue to UniRef100_A7PQK5 Cluster: Chromoso...  1326   0.0  
gnl|LJGI|DC598240 homologue to UniRef100_A7PQK5 Cluster: Chromos...   264   1e-69

>gnl|LJGI|TC76962 homologue to UniRef100_A7PQK5 Cluster: Chromosome chr6 scaffold_25,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr6 scaffold_25, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (23%)
          Length = 1001

 Score = 1326 bits (669), Expect = 0.0
 Identities = 697/706 (98%), Gaps = 2/706 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    atggcgatgtcagggatgcgaggactctccgtgttcatcagcgacatccgcaattgccag 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296  atggcgatgtcagggatgcgaggactctccgtgttcatcagcgacatccgcaattgccag 355

                                                                        
Query: 61   aacaaagacc-aggaaaggcttcgcgttgacaaggagctcggcaacattcgtacacgctt 119
            |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356  aacaaagacccaggaaaggcttcgcgttgacaaggagctcggcaacattcgtacacgctt 415

                                                                        
Query: 120  caagaacgaaaaggctctgactccatatgagaaaaagaaatatgtttggaaaatgcttta 179
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416  caagaacgaaaaggctctgactccatatgagaaaaagaaatatgtttggaaaatgcttta 475

                                                                        
Query: 180  catatacatgcttggctatgacgtggattttggtcacatggaagctgtttcgcttatatc 239
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476  catatacatgcttggctatgacgtggattttggtcacatggaagctgtttcgcttatatc 535

                                                                        
Query: 240  tgccccaaagtatccagaaaagcaggttgggtacattgtaacatcaagtttgcttaatga 299
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536  tgccccaaagtatccagaaaagcaggttgggtacattgtaacatcaagtttgcttaatga 595

                                                                        
Query: 300  aaatcatgacttcctcaggttggctataaatactgtgcgcaatgatattattggtcgcaa 359
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596  aaatcatgacttcctcaggttggctataaatactgtgcgcaatgatattattggtcgcaa 655

                                                                        
Query: 360  tgaaaccttccaatgcctagctttgactatggttggaaatattggcggtagagaatttgc 419
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656  tgaaaccttccaatgcctagctttgactatggttggaaatattggcggtagagaatttgc 715

                                                                        
Query: 420  ggagtccttagcacctgatgtacagaagttgctgttatctagcagctgcagaccacttgt 479
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716  ggagtccttagcacctgatgtacagaagttgctgttatctagcagctgcagaccacttgt 775

                                                                        
Query: 480  aagnnnnnnngccgcgttgtgtttgctccgcttgtacaggaaaaatcctgatgttgtcaa 539
            |||       ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 776  aagaaaaaaagccgcgttgtgtttgctccgcttgtacaggaaaaatcctgatgttgtcaa 835

                                                                        
Query: 540  tgtagatggatgggcggatcggatggcacaacttttggatgaacgagatcttggtgtttt 599
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 836  tgtagatggatgggcggatcggatggcacaacttttggatgaacgagatcttggtgtttt 895

                                                                        
Query: 600  gacatcttctatgagtctccttgttgctttagtatcaaaccaaca-cgagggttattgga 658
            ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 896  gacatcttctatgagtctccttgttgctttagtatcaaaccaacancgagggttattgga 955

                                                          
Query: 659  gttgtcttcctaagtgtgttaaaactttagaacgtcttgctaggaa 704
            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 956  gttgtcttcctaagtgtgttaaaactttagaacgtcttgctaggaa 1001


>gnl|LJGI|DC598240 homologue to UniRef100_A7PQK5 Cluster: Chromosome chr6 scaffold_25,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr6 scaffold_25, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (4%)
          Length = 573

 Score =  264 bits (133), Expect = 1e-69
 Identities = 133/133 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcgatgtcagggatgcgaggactctccgtgttcatcagcgacatccgcaattgccag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 atggcgatgtcagggatgcgaggactctccgtgttcatcagcgacatccgcaattgccag 333

                                                                       
Query: 61  aacaaagaccaggaaaggcttcgcgttgacaaggagctcggcaacattcgtacacgcttc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 aacaaagaccaggaaaggcttcgcgttgacaaggagctcggcaacattcgtacacgcttc 393

                        
Query: 121 aagaacgaaaagg 133
           |||||||||||||
Sbjct: 394 aagaacgaaaagg 406