Miyakogusa Predicted Gene
- Lj3g3v1113340.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v1113340.1 Non Chatacterized Hit- tr|I1LTN3|I1LTN3_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,71.32,0,DUF966,Protein of unknown function DUF966; seg,NULL;
FAMILY NOT NAMED,NULL,CUFF.42235.1
(1632 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC81062 157 3e-37
gnl|LJGI|DC599265 similar to UniRef100_A7NT66 Cluster: Chromosom... 94 3e-18
gnl|LJGI|TC70292 84 3e-15
gnl|LJGI|BP044172 UniRef100_A7NT66 Cluster: Chromosome chr18 sca... 64 3e-09
>gnl|LJGI|TC81062
Length = 930
Score = 157 bits (79), Expect = 3e-37
Identities = 236/287 (82%), Gaps = 6/287 (2%)
Strand = Plus / Plus
Query: 995 tatcagtgaaaaaccacagtttggaccttattccttcttcctataaggcgaggttttcac 1054
|||||||||||||||||||||| | |||||||||||| ||||||| ||||||||
Sbjct: 18 tatcagtgaaaaaccacagttttggccttattccttc---ctataagcataggttttctg 74
Query: 1055 attcaaaattcccctccccattgttctcaacatctgctatgttgggggaatttgattacc 1114
||||||||||||| || || ||||||| || ||| |||||| ||||||||||||| |
Sbjct: 75 attcaaaattcccttctccgctgttctccacttcttttatgttaggggaatttgattgct 134
Query: 1115 tagcagagaatccaaaggtgatgggccacagatcggaagacaaagaatgttttagtggga 1174
||||||||||||||||| ||||| | || | |||||||||||||| ||||||||||
Sbjct: 135 tagcagagaatccaaagctgatgaatcttaggttggaagacaaagaatactttagtggga 194
Query: 1175 gcttagttgagtctaaaatgctgaaggaagaggatggacataatgttcagaaacgctctt 1234
||||| ||||| ||||| |||||||||| || | |||||| |||| |||||| ||||
Sbjct: 195 gcttaattgagactaaa---ctgaaggaaggagaggcacataaagttctgaaacgttctt 251
Query: 1235 cttctttcagtgatgagaggacatatcaagagctgaaatcacaagaa 1281
|||| | || |||||| ||||||||| |||| | |||| ||||||||
Sbjct: 252 cttcctacaatgatgaaaggacatataaagaccagaaaccacaagaa 298
Score = 65.9 bits (33), Expect = 7e-10
Identities = 54/60 (90%), Gaps = 2/60 (3%)
Strand = Plus / Plus
Query: 1489 aaggcttgcttccggagctcgagttataatccaatca--aaaaccatcttgtgacacagc 1546
|||||||||||| |||||||| ||||||||||||||| ||||||| ||||||||||||
Sbjct: 562 aaggcttgcttcaggagctcgggttataatccaatcatccaaaccattttgtgacacagc 621
>gnl|LJGI|DC599265 similar to UniRef100_A7NT66 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (75%)
Length = 566
Score = 93.7 bits (47), Expect = 3e-18
Identities = 110/131 (83%)
Strand = Plus / Plus
Query: 34 agtccggagagggccaaagtgtggacggagaagtcacccaagtatcaccagcaccgcaag 93
||||| |||||||||||||||||||| ||||||||||| ||||| || ||| | |||
Sbjct: 412 agtcctgagagggccaaagtgtggactgagaagtcacctaagtaccatcagagtctgaag 471
Query: 94 gtgccggtggtttattatctttgccggaataggcagctagagcatcctcatttcatggag 153
|| || ||| |||| ||||| || ||||||||||||| ||||| |||||||||||||||
Sbjct: 472 gttcctgtgatttactatctctgtaggaataggcagctggagcaccctcatttcatggag 531
Query: 154 gttccactttc 164
|| || |||||
Sbjct: 532 gtccctctttc 542
>gnl|LJGI|TC70292
Length = 715
Score = 83.8 bits (42), Expect = 3e-15
Identities = 84/98 (85%)
Strand = Plus / Plus
Query: 259 agaagctacaagaacggatttgtgtggcatgatctctctgaagatgatataattctacct 318
|||||||||||||| |||||||||||||||||||||| |||||||||| | | ||||
Sbjct: 133 agaagctacaagaatggatttgtgtggcatgatctctgcgaagatgataaatctttacca 192
Query: 319 gcacatggaaatgagtatgtcctcaaaggttcagagct 356
| ||||||||| || ||||||||||||| || |||||
Sbjct: 193 tcccatggaaataagaatgtcctcaaaggctctgagct 230
>gnl|LJGI|BP044172 UniRef100_A7NT66 Cluster: Chromosome chr18 scaffold_1, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr18 scaffold_1, whole genome shotgun sequence - Vitis
vinifera (Grape), partial (12%)
Length = 220
Score = 63.9 bits (32), Expect = 3e-09
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 34 agtccggagagggccaaagtgtggacggagaagtcacccaagta 77
||||| |||||||||||||||||||| ||||||||||| |||||
Sbjct: 129 agtcctgagagggccaaagtgtggactgagaagtcacctaagta 172