Miyakogusa Predicted Gene
- Lj3g3v1102870.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v1102870.1 tr|G8A151|G8A151_MEDTR Dolichol kinase
OS=Medicago truncatula GN=MTR_117s0018 PE=4
SV=1,84.99,0,UNCHARACTERIZED,NULL; TRANSMEMBRANE PROTEIN
15-RELATED,NULL; seg,NULL,CUFF.42206.1
(1605 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC70538 weakly similar to UniRef100_A7PQT2 Cluster: Chr... 819 0.0
gnl|LJGI|TC66046 homologue to UniRef100_A7PQT2 Cluster: Chromoso... 325 5e-88
>gnl|LJGI|TC70538 weakly similar to UniRef100_A7PQT2 Cluster: Chromosome chr6
scaffold_25, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr6 scaffold_25, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (15%)
Length = 665
Score = 819 bits (413), Expect = 0.0
Identities = 423/425 (99%), Gaps = 1/425 (0%)
Strand = Plus / Plus
Query: 136 gaaatcgccgtcgactccgcaaattcccccttcgctttccgcacccgccccgccgcctcc 195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gaaatcgccgtcgactccgcaaattcccccttcgctttccgcacccgccccgccgcctcc 300
Query: 196 tccggcatcctcctcggcgccgtcacactcccttccctcatcctctccaagctcgttcag 255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tccggcatcctcctcggcgccgtcacactcccttccctcatcctctccaagctcgttcag 360
Query: 256 tcgtcgcgtggtttctccctcgctcaaattcaaccccaagagattcaatatctgacattg 315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tcgtcgcgtggtttctccctcgctcaaattcaaccccaagagattcaatatctgacattg 420
Query: 316 caatactgggccacatctgccagcgtcttcactgtgcttttgttcctcgctttcgcgatg 375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 caatactgggccacatctgccagcgtcttcactgtgcttttgttcctcgctttcgcgatg 480
Query: 376 cgccgccgtggtcattggggtgttaggttgagcttgtgctttgttttctttcaaggtgtc 435
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 481 cgccgccgtggtcattggggtgttaggttgagcttgtgcttcgttttctttcaaggtgtc 540
Query: 436 ttctgcattg-cggcgcttgctacaacatctcaaattggactgcacccggtgctgaagct 494
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ttctgcattgccggcgcttgctacaacatctcaaattggactgcacccggtgctgaagct 600
Query: 495 ttcatgggtattttgccatggattcgcctccgtgaagctgattcagcatttcctcagaat 554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttcatgggtattttgccatggattcgcctccgtgaagctgattcagcatttcctcagaat 660
Query: 555 tttcc 559
|||||
Sbjct: 661 tttcc 665
Score = 117 bits (59), Expect = 2e-25
Identities = 59/59 (100%)
Strand = Plus / Plus
Query: 1 atgacgacgtcgtttttcaccggcgagagaatcgtcgtcctcttcttcatctccaagat 59
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106 atgacgacgtcgtttttcaccggcgagagaatcgtcgtcctcttcttcatctccaagat 164
>gnl|LJGI|TC66046 homologue to UniRef100_A7PQT2 Cluster: Chromosome chr6 scaffold_25,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_25, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (14%)
Length = 921
Score = 325 bits (164), Expect = 5e-88
Identities = 170/172 (98%)
Strand = Plus / Plus
Query: 1434 attgaggtggagtaaaactggcaagaaaacagttgaaggtactgcagctggtataacatc 1493
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 attgaggtggagtaaaactggcaagaaaacagttgaaggtactgcagctggtataacatc 60
Query: 1494 tgtgctagctgcttgctctttactccttccactcttcgcgtcaactggatacattctcac 1553
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgtgctagctgcttgctctttactccttccactcttcgcgtcaactggatacattctcac 120
Query: 1554 tcagcattggttctcactacctctagctgtgactgtaagtggtttgtgagag 1605
|||||||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 121 tcagcattggttctcactacttctagctgtgactgtaagtggtttgttagag 172