Miyakogusa Predicted Gene
- Lj3g3v1101550.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v1101550.1 tr|A9RY74|A9RY74_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_206826,32.5,6e-19,seg,NULL; DUF716,Protein of unknown
function DUF716, TMEM45; SUBFAMILY NOT NAMED,NULL; EPIDIDYMAL
ME,NODE_26858_length_1180_cov_47.900002.path1.1
(588 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60288 similar to UniRef100_A7QHC3 Cluster: Chromosome... 1110 0.0
gnl|LJGI|FS319814 similar to UniRef100_A7QHC3 Cluster: Chromosom... 864 0.0
gnl|LJGI|FS338263 similar to UniRef100_A7QHC3 Cluster: Chromosom... 837 0.0
gnl|LJGI|DC593813 similar to UniRef100_A7QHC3 Cluster: Chromosom... 222 2e-57
gnl|LJGI|TC71792 similar to UniRef100_Q7X6G3 Cluster: Plant vira... 170 6e-42
gnl|LJGI|TC70144 similar to UniRef100_Q7X6G3 Cluster: Plant vira... 135 3e-31
gnl|LJGI|TC79869 similar to UniRef100_A7NZK1 Cluster: Chromosome... 78 7e-14
>gnl|LJGI|TC60288 similar to UniRef100_A7QHC3 Cluster: Chromosome chr2 scaffold_97,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_97, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (86%)
Length = 1385
Score = 1110 bits (560), Expect = 0.0
Identities = 581/588 (98%)
Strand = Plus / Plus
Query: 1 atgtgcatcgagctcttctattcaactcacctcaagatatttgttggtggagtccttaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 atgtgcatcgagctcttctattcaactcacctcaagatatttgttggtggagtccttaac 630
Query: 61 ccctctcatatgaatgactttgagcactctggaatgctttttatgtttttcatcttgggt 120
|||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 631 ccctctcacatgaatgactttgagcactcgggaatgctttttatgtttttcatcttgggt 690
Query: 121 gttgttatcatacttaccgaaaagaccagatttgttcctttgccagaaggtgctctttgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 gttgttatcatacttaccgaaaagaccagatttgttcctttgccagaaggtgctctttgt 750
Query: 181 ttgattgctgccgcagcattctgcgcagaatatcttctattctactttcattcaacaaca 240
|||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 751 ctgattgctgctgcagcattctgcacagaatatcttctattctactttcattcaacaaca 810
Query: 241 cataagggccttgaaggctgttaccacaccctccttgtctacctgatagggctgtgcatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 811 cataagggccttgaaggctgttaccacaccctccttgtctacctgatagggctgtgcatt 870
Query: 301 ttatcctcagttgctggagcccttttgccaaccagttttccagtggatttatgtaaaggc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 871 ttatcctcagttgctggagcccttttgccaaccagttttccagtggatttatgtaaaggc 930
Query: 361 attgctataacactgcaaggcatctggttctatcagactgcctttgttctttatggcccc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 931 attgctataacactgcaaggcatctggttctatcagactgcctttgttctttatggcccc 990
Query: 421 atgctaccagatggttgtaagataagggataatagtatcacatgtcattcagatgacagt 480
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 991 atgctaccggatggttgtaagataagggataatagtatcacatgtcattcagatgacagt 1050
Query: 481 gaggttcggggcgaattgcttgctagctttcagctctttgttgctgttcttgtggtcctt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1051 gaggttcggggcgaattgcttgctagctttcagctctttgttgctgttcttgtggtcttt 1110
Query: 541 gtgggaactttagcatcctatgcttatgcagcttcaaaatatgggaac 588
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1111 gtgggaactttagcatcctatgcttatgcagcttcaaaatatgggaac 1158
>gnl|LJGI|FS319814 similar to UniRef100_A7QHC3 Cluster: Chromosome chr2 scaffold_97,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_97, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (58%)
Length = 804
Score = 864 bits (436), Expect = 0.0
Identities = 436/436 (100%)
Strand = Plus / Plus
Query: 1 atgtgcatcgagctcttctattcaactcacctcaagatatttgttggtggagtccttaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 atgtgcatcgagctcttctattcaactcacctcaagatatttgttggtggagtccttaac 428
Query: 61 ccctctcatatgaatgactttgagcactctggaatgctttttatgtttttcatcttgggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 ccctctcatatgaatgactttgagcactctggaatgctttttatgtttttcatcttgggt 488
Query: 121 gttgttatcatacttaccgaaaagaccagatttgttcctttgccagaaggtgctctttgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 gttgttatcatacttaccgaaaagaccagatttgttcctttgccagaaggtgctctttgt 548
Query: 181 ttgattgctgccgcagcattctgcgcagaatatcttctattctactttcattcaacaaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 ttgattgctgccgcagcattctgcgcagaatatcttctattctactttcattcaacaaca 608
Query: 241 cataagggccttgaaggctgttaccacaccctccttgtctacctgatagggctgtgcatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 cataagggccttgaaggctgttaccacaccctccttgtctacctgatagggctgtgcatt 668
Query: 301 ttatcctcagttgctggagcccttttgccaaccagttttccagtggatttatgtaaaggc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 ttatcctcagttgctggagcccttttgccaaccagttttccagtggatttatgtaaaggc 728
Query: 361 attgctataacactgcaaggcatctggttctatcagactgcctttgttctttatggcccc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 attgctataacactgcaaggcatctggttctatcagactgcctttgttctttatggcccc 788
Query: 421 atgctaccagatggtt 436
||||||||||||||||
Sbjct: 789 atgctaccagatggtt 804
>gnl|LJGI|FS338263 similar to UniRef100_A7QHC3 Cluster: Chromosome chr2 scaffold_97,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_97, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (44%)
Length = 854
Score = 837 bits (422), Expect = 0.0
Identities = 437/442 (98%)
Strand = Plus / Plus
Query: 147 cagatttgttcctttgccagaaggtgctctttgtttgattgctgccgcagcattctgcgc 206
|||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| |
Sbjct: 271 cagatttgttcctttgccagaaggtgctctttgtctgattgctgctgcagcattctgcac 330
Query: 207 agaatatcttctattctactttcattcaacaacacataagggccttgaaggctgttacca 266
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 agaatatcttctattctactttcattcaacaacacataagggccttgaaggctgttacca 390
Query: 267 caccctccttgtctacctgatagggctgtgcattttatcctcagttgctggagccctttt 326
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 caccctccttgtctacctgatagggctgtgcattttatcctcagttgctggagccctttt 450
Query: 327 gccaaccagttttccagtggatttatgtaaaggcattgctataacactgcaaggcatctg 386
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 gccaaccagttttccagtggatttatgtaaaggcattgctataacactgcaaggcatctg 510
Query: 387 gttctatcagactgcctttgttctttatggccccatgctaccagatggttgtaagataag 446
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 511 gttctatcagactgcctttgttctttatggccccatgctaccggatggttgtaagataag 570
Query: 447 ggataatagtatcacatgtcattcagatgacagtgaggttcggggcgaattgcttgctag 506
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 ggataatagtatcacatgtcattcagatgacagtgaggttcggggcgaattgcttgctag 630
Query: 507 ctttcagctctttgttgctgttcttgtggtccttgtgggaactttagcatcctatgctta 566
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 631 ctttcagctctttgttgctgttcttgtggtctttgtgggaactttagcatcctatgctta 690
Query: 567 tgcagcttcaaaatatgggaac 588
||||||||||||||||||||||
Sbjct: 691 tgcagcttcaaaatatgggaac 712
>gnl|LJGI|DC593813 similar to UniRef100_A7QHC3 Cluster: Chromosome chr2 scaffold_97,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_97, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (38%)
Length = 596
Score = 222 bits (112), Expect = 2e-57
Identities = 118/120 (98%)
Strand = Plus / Plus
Query: 1 atgtgcatcgagctcttctattcaactcacctcaagatatttgttggtggagtccttaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 atgtgcatcgagctcttctattcaactcacctcaagatatttgttggtggagtccttaac 536
Query: 61 ccctctcatatgaatgactttgagcactctggaatgctttttatgtttttcatcttgggt 120
|||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 537 ccctctcacatgaatgactttgagcactcgggaatgctttttatgtttttcatcttgggt 596
>gnl|LJGI|TC71792 similar to UniRef100_Q7X6G3 Cluster: Plant viral-response family
protein; n=1; Solanum bulbocastanum|Rep: Plant
viral-response family protein - Solanum bulbocastanum
(Wild potato), partial (8%)
Length = 590
Score = 170 bits (86), Expect = 6e-42
Identities = 143/161 (88%), Gaps = 2/161 (1%)
Strand = Plus / Plus
Query: 430 gatggttgtaagataagggataatagtatcacatgtcattcagatgacagtgaggttcgg 489
||||||||| |||||||| |||| ||||||||||||||||||| |||||||||| | ||
Sbjct: 104 gatggttgttagataaggaataacagtatcacatgtcattcagctgacagtgagatcagg 163
Query: 490 ggcgaattgcttgctagctttcagctctttgttgctgttcttgtggtccttgtggga--a 547
|| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 164 ggtgaattacttgctagctttcagctctttgttgctgttcttgtggtccttgtgggggga 223
Query: 548 ctttagcatcctatgcttatgcagcttcaaaatatgggaac 588
| ||||||| ||||| ||||||| ||| ||||||||||||
Sbjct: 224 ttgtagcatcttatgcctatgcagtttccaaatatgggaac 264
Score = 103 bits (52), Expect = 1e-21
Identities = 86/96 (89%), Gaps = 1/96 (1%)
Strand = Plus / Plus
Query: 174 tctttgtttgattgctgccgcagcattctgcgcagaatatcttctattctactttcattc 233
|||||||||||||||||| || |||||||| ||||| |||| ||||||||||||||||||
Sbjct: 1 tctttgtttgattgctgcagctgcattctgtgcagagtatcatctattctactttcattc 60
Query: 234 aacaaca-cataagggccttgaaggctgttaccaca 268
||| ||| ||||||| |||||| | |||||||||||
Sbjct: 61 aacgacaccataaggaccttgaggcctgttaccaca 96
>gnl|LJGI|TC70144 similar to UniRef100_Q7X6G3 Cluster: Plant viral-response family
protein; n=1; Solanum bulbocastanum|Rep: Plant
viral-response family protein - Solanum bulbocastanum
(Wild potato), partial (15%)
Length = 574
Score = 135 bits (68), Expect = 3e-31
Identities = 180/213 (84%), Gaps = 12/213 (5%)
Strand = Plus / Plus
Query: 160 ttgccagaaggtgctctttgtttgattgctgccgcagcattctgcgcagaatatcttcta 219
||||| ||||||| |||||||||||||||||| || |||||||| || || |||||||||
Sbjct: 301 ttgccggaaggtgttctttgtttgattgctgcggc-gcattctgtgc-gagtatcttcta 358
Query: 220 ttctactttcattcaacaacacataagggccttgaaggctgttaccacaccctccttgtc 279
| |||||||||||||||||||||||||||||||| |||||| |||||| ||||||||||
Sbjct: 359 ctttactttcattcaacaacacataagggccttgagggctgtaaccacatcctccttgtc 418
Query: 280 ta--------cctgatagggctgtg-cattttatcctcagttgctggagcccttttgcca 330
|| | ||||| ||||||| |||||||| ||||||| | | ||||||||||
Sbjct: 419 tagttgtcttcatgatatggctgtgtaattttatcttcagttgttatatcccttttgcc- 477
Query: 331 accagttttccagtggatttatgtaaaggcatt 363
||||| ||| ||||||||||||||||| |||||
Sbjct: 478 accagattttcagtggatttatgtaaatgcatt 510
>gnl|LJGI|TC79869 similar to UniRef100_A7NZK1 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (27%)
Length = 852
Score = 77.8 bits (39), Expect = 7e-14
Identities = 108/131 (82%)
Strand = Plus / Plus
Query: 456 tatcacatgtcattcagatgacagtgaggttcggggcgaattgcttgctagctttcagct 515
||||||||||||||| | || || ||| |||| || ||||||||||||| ||||| |
Sbjct: 12 tatcacatgtcattccaaagagagcgagcttcgaggtgaattgcttgctaatgttcaggt 71
Query: 516 ctttgttgctgttcttgtggtccttgtgggaactttagcatcctatgcttatgcagcttc 575
||||||||| || ||| || ||||| ||||||||||||||||||| | |||||||||
Sbjct: 72 ctttgttgcagtctttgctgttcttgtaggaactttagcatcctatgggtttgcagcttc 131
Query: 576 aaaatatggga 586
|| ||||||||
Sbjct: 132 aagatatggga 142